RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
TPM3-204ENST00000323144 GPHNQ9NQX3 736 aaPredicted RBP14.37□□□□□ -0.11
TPM3-204ENST00000323144 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
TPM3-204ENST00000323144 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 IFIT3O14879 490 aaKnown RBP14.36□□□□□ -0.11
TPM3-204ENST00000323144 ZBTB5O15062 677 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 RGS20O76081 388 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 GH1P01241 217 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 MYOGP15173 224 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 WTAPQ15007 396 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 RUFY2Q8WXA3 655 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
TPM3-204ENST00000323144 KAT2BQ92831 832 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.111e-12■□□□□ 9.1
TPM3-204ENST00000323144 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
TPM3-204ENST00000323144 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 RBM8AQ9Y5S9 174 aaKnown RBP14.36□□□□□ -0.11
TPM3-204ENST00000323144 TRANK1O15050 2925 aa14.36□□□□□ -0.11
TPM3-204ENST00000323144 FGBP02675 491 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 TROAPQ12815 778 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 TRDNQ13061 729 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 STXBP2Q15833 593 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
TPM3-204ENST00000323144 GDF6Q6KF10 455 aaPredicted RBP14.35□□□□□ -0.11
TPM3-204ENST00000323144 NFRKBQ6P4R8 1299 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 MTIF3Q9H2K0 278 aaKnown RBP14.35□□□□□ -0.11
TPM3-204ENST00000323144 PRDM6Q9NQX0 595 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 MRVI1Q9Y6F6 885 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 FRMPD4Q14CM0 1322 aa14.35□□□□□ -0.11
TPM3-204ENST00000323144 B4DLN1 442 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 F2P00734 622 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 NR3C2P08235 984 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 MYCLP12524 364 aaPredicted RBP14.34□□□□□ -0.11
TPM3-204ENST00000323144 UBA1P22314 1058 aaKnown RBP14.34□□□□□ -0.11
TPM3-204ENST00000323144 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
TPM3-204ENST00000323144 ADGRE1Q14246 886 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 PGM5Q15124 567 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 RAB30Q15771 203 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 NCOA7Q8NI08 942 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 IWS1Q96ST2 819 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 RIOX1Q9H6W3 641 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 DDX41Q9UJV9 622 aaKnown RBP14.34□□□□□ -0.11
TPM3-204ENST00000323144 ATG2AQ2TAZ0 1938 aa14.34□□□□□ -0.11
TPM3-204ENST00000323144 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 KPNA6O60684 536 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 ARHGEF15O94989 841 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 SUPT20HL2P0C7V6 817 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 WNT8BQ93098 351 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 MAF1Q9H063 256 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 LSG1Q9H089 658 aaKnown RBP14.33□□□□□ -0.12
TPM3-204ENST00000323144 LY9Q9HBG7 655 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 NOD1Q9Y239 953 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
TPM3-204ENST00000323144 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 ERICH2A1L162 156 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PLEKHA8P1O95397 391 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PFKMP08237 780 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
TPM3-204ENST00000323144 RXRAP19793 462 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PSEN2P49810 448 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PTPN11Q06124 597 aaPredicted RBP14.32□□□□□ -0.12
TPM3-204ENST00000323144 HIC1Q14526 733 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PTGISQ16647 500 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 TCTN1Q2MV58 587 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PPP2R2DQ66LE6 453 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 SPRED2Q7Z698 418 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 MAP4K1Q92918 833 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
TPM3-204ENST00000323144 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 MSRAQ9UJ68 235 aa14.32□□□□□ -0.12
TPM3-204ENST00000323144 SH2B2O14492 632 aaPredicted RBP14.31□□□□□ -0.12
TPM3-204ENST00000323144 PRC1O43663 620 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 EIF3JO75822 258 aaKnown RBP14.31□□□□□ -0.12
TPM3-204ENST00000323144 GGPS1O95749 300 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 HOXD8P13378 290 aaPredicted RBP14.31□□□□□ -0.12
TPM3-204ENST00000323144 SP2Q02086 613 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 MFSD10Q14728 455 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 SART3Q15020 963 aaKnown RBP14.31□□□□□ -0.12
TPM3-204ENST00000323144 HSDL1Q3SXM5 330 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 SESTD1Q86VW0 696 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 GAS2L1Q99501 681 aaPredicted RBP14.31□□□□□ -0.12
TPM3-204ENST00000323144 ESYT1Q9BSJ8 1104 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 BCAS3Q9H6U6 928 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 HDAC6Q9UBN7 1215 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 GTF2IRD1Q9UHL9 959 aa14.31□□□□□ -0.12
TPM3-204ENST00000323144 EPOPA6NHQ4 379 aa14.3□□□□□ -0.12
TPM3-204ENST00000323144 GCOM1H8Y6P7 765 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms