RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 DIDO1Q9BTC0 2240 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 NEXMIFQ5QGS0 1516 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 KIF11P52732 1056 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 SERPINI1Q99574 410 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 URB1O60287 2271 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 KRT5P13647 590 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MDH1P40925 334 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF658Q5TYW1 1059 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 LINC00301Q8NCQ3 95 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MAP4K1Q92918 833 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 CYFIP2Q96F07 1278 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 NDE1Q9NXR1 346 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MLH3Q9UHC1 1453 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 SPDYE3A6NKU9 549 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 HARSP12081 509 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 HDLBPQ00341 1268 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 DAB2IPQ5VWQ8 1189 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF473Q8WTR7 871 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 IL17RAQ96F46 866 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 SERTAD1Q9UHV2 236 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 CACNA1SQ13698 1873 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 B4E1Z4 1266 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 RPS6KA5O75582 802 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ECM2O94769 699 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ATP1A3P13637 1013 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 LONP1P36776 959 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 RASGRP2Q7LDG7 609 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MFN1Q8IWA4 741 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 CTAGE3PQ8IX95 158 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 APPBP2Q92624 585 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 HAUS7Q99871 368 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 RCN2Q14257 317 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 LDHAL6AQ6ZMR3 332 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 THOC1Q96FV9 657 aaKnown RBP7.66□□□□□ -1.18
SMC1A-201ENST00000322213 SLC40A1Q9NP59 571 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 USP40Q9NVE5 1235 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 ZFP69BQ9UJL9 534 aa7.66□□□□□ -1.18
SMC1A-201ENST00000322213 MGEA5O60502 916 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 PLA2G4AP47712 749 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 NAA35Q5VZE5 725 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 LCA5Q86VQ0 697 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 SDCCAG3Q96C92 435 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 LAMB1P07942 1786 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 PPP1R37O75864 691 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 KRT31Q15323 416 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF449Q6P9G9 518 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 MYLK4Q86YV6 388 aaPredicted RBP7.65□□□□□ -1.18
SMC1A-201ENST00000322213 CATSPER1Q8NEC5 780 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 UIMC1Q96RL1 719 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 EFHD1Q9BUP0 239 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 MCF2P10911 925 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 VSNL1P62760 191 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF827Q17R98 1081 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 TRIM74Q86UV6 250 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 TRIM73Q86UV7 250 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 DZIP3Q86Y13 1208 aaKnown RBP7.65□□□□□ -1.18
SMC1A-201ENST00000322213 PLIN2Q99541 437 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 NT5C3AQ9H0P0 336 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 GLT8D2Q9H1C3 349 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 MRPL44Q9H9J2 332 aaKnown RBP7.65□□□□□ -1.18
SMC1A-201ENST00000322213 LRWD1Q9UFC0 647 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 DIS3Q9Y2L1 958 aaKnown RBP7.65□□□□□ -1.18
SMC1A-201ENST00000322213 ORC6Q9Y5N6 252 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 CCDC188H7C350 402 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 APOEP02649 317 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 KCNA3P22001 575 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 CTCFP49711 727 aaPredicted RBP7.65□□□□□ -1.18
SMC1A-201ENST00000322213 ZBED6P86452 979 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 CYB5D1Q6P9G0 228 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 TRPM8Q7Z2W7 1104 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 PCDHA5Q9Y5H7 936 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 COMMD10Q9Y6G5 202 aa7.65□□□□□ -1.18
SMC1A-201ENST00000322213 CCDC80Q76M96 950 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 GRAMD1AQ96CP6 724 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 PDP2Q9P2J9 529 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 RP1L1Q8IWN7 2480 aaPredicted RBP7.65□□□□□ -1.19
SMC1A-201ENST00000322213 NVLO15381 856 aaKnown RBP7.65□□□□□ -1.19
SMC1A-201ENST00000322213 MOCS3O95396 460 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 PDIA3P30101 505 aaKnown RBP7.65□□□□□ -1.19
SMC1A-201ENST00000322213 SPARCL1Q14515 664 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 IL1RAPL1Q9NZN1 696 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 LCMT1Q9UIC8 334 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 PODXLO00592 558 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 SERPING1P05155 500 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 NUGGCQ68CJ6 796 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 EPM2AIP1Q7L775 607 aaPredicted RBP7.65□□□□□ -1.19
SMC1A-201ENST00000322213 MAML1Q92585 1016 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 MRRFQ96E11 262 aaKnown RBP7.65□□□□□ -1.19
SMC1A-201ENST00000322213 IWS1Q96ST2 819 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 ARFGEF2Q9Y6D5 1785 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 RFX7Q2KHR2 1363 aa7.65□□□□□ -1.19
SMC1A-201ENST00000322213 MX2P20592 715 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 IRAK1P51617 712 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 CNGA3Q16281 694 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 LRIG3Q6UXM1 1119 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 NSUN7Q8NE18 718 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 SEC16BQ96JE7 1060 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 FAM167BQ9BTA0 163 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 NOVA2Q9UNW9 492 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms