RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 HTTP42858 3142 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 LCTP09848 1927 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 SMCO2A6NFE2 343 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 IGHA2P01877 340 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 CYBAP13498 195 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 PTGS1P23219 599 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 HSD17B4P51659 736 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 MAP3K21Q5TCX8 1036 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 CPLX2Q6PUV4 134 aaKnown RBP9.04□□□□□ -0.96
CDC42-201ENST00000315554 FBXO16Q8IX29 292 aaPredicted RBP9.04□□□□□ -0.96
CDC42-201ENST00000315554 TRIM22Q8IYM9 498 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 NSUN7Q8NE18 718 aaKnown RBP9.04□□□□□ -0.96
CDC42-201ENST00000315554 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 IL31RAQ8NI17 732 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 SMARCC2Q8TAQ2 1214 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 RMDN3Q96TC7 470 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 RNF26Q9BY78 433 aaPredicted RBP9.04□□□□□ -0.96
CDC42-201ENST00000315554 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.04□□□□□ -0.961e-9■■■■■ 28.6
CDC42-201ENST00000315554 PSTPIP2Q9H939 334 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 GJB4Q9NTQ9 266 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 TMEM260Q9NX78 707 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 BARHL2Q9NY43 387 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 PLXNA1Q9UIW2 1896 aa9.04□□□□□ -0.96
CDC42-201ENST00000315554 RPTORQ8N122 1335 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 ASB14A6NK59 587 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 MEIS2O14770 477 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 CDKL5O76039 1030 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 FDPSP14324 419 aaKnown RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 ADCY7P51828 1080 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 PDE4DQ08499 809 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 TRAF1Q13077 416 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 TMEM63BQ5T3F8 832 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 ARHGEF16Q5VV41 709 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 CUL5Q93034 780 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 ZSCAN31Q96LW9 406 aaPredicted RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 DEFB118Q96PH6 123 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 PDGFCQ9NRA1 345 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 ORC3Q9UBD5 711 aaPredicted RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 ADD3Q9UEY8 706 aaKnown RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 KCNJ14Q9UNX9 436 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 CNPY2Q9Y2B0 182 aa9.03□□□□□ -0.96
CDC42-201ENST00000315554 RBBP6Q7Z6E9 1792 aaKnown RBP9.03□□□□□ -0.96
CDC42-201ENST00000315554 SYNGAP1Q96PV0 1343 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 RIOK3O14730 519 aaKnown RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 DEXIO95424 95 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 ZNF865P0CJ78 1059 aaPredicted RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 EN2P19622 333 aaPredicted RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 ACVR2BQ13705 512 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 JAKMIP3Q5VZ66 844 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 MAMDC4Q6UXC1 1216 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 TMX3Q96JJ7 454 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 PXMP2Q9NR77 195 aa9.02□□□□□ -0.96
CDC42-201ENST00000315554 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.96
CDC42-201ENST00000315554 hCG_1984214I3L0E3 225 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 ADCY6O43306 1168 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 SORBS3O60504 671 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 NR3C2P08235 984 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 ADCYAP1R1P41586 468 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 NLRP5P59047 1200 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 GHRHRQ02643 423 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 PGM5Q15124 567 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 GJC2Q5T442 439 aaPredicted RBP9.02□□□□□ -0.97
CDC42-201ENST00000315554 ZNF713Q8N859 430 aaPredicted RBP9.02□□□□□ -0.97
CDC42-201ENST00000315554 DNERQ8NFT8 737 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 U2AF1L4Q8WU68 220 aaKnown RBP9.02□□□□□ -0.97
CDC42-201ENST00000315554 PDCD2LQ9BRP1 358 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 ALG1Q9BT22 464 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 KATNBL1Q9H079 304 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 RIC8AQ9NPQ8 531 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 PAK6Q9NQU5 681 aaPredicted RBP9.02□□□□□ -0.97
CDC42-201ENST00000315554 SH2B1Q9NRF2 756 aaPredicted RBP9.02□□□□□ -0.97
CDC42-201ENST00000315554 PCDHA6Q9UN73 950 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 PCDHA8Q9Y5H6 950 aa9.02□□□□□ -0.97
CDC42-201ENST00000315554 MCM3APO60318 1980 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 STK36Q9NRP7 1315 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 PIK3CDO00329 1044 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 TFRCP02786 760 aaKnown RBP9.01□□□□□ -0.97
CDC42-201ENST00000315554 EDNRBP24530 442 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 MRPL12P52815 198 aaKnown RBP9.01□□□□□ -0.97
CDC42-201ENST00000315554 GUCY1B3Q02153 619 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 SEPT14Q6ZU15 432 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 MSL3Q8N5Y2 521 aaKnown RBP9.01□□□□□ -0.97
CDC42-201ENST00000315554 CCDC148Q8NFR7 591 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 MORC4Q8TE76 937 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 ANO3Q9BYT9 981 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 ABHD16BQ9H3Z7 469 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 C6orf50Q9HD87 102 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
CDC42-201ENST00000315554 DDX20Q9UHI6 824 aaKnown RBP9.01□□□□□ -0.97
CDC42-201ENST00000315554 LRRC37A2A6NM11 1700 aa9□□□□□ -0.97
CDC42-201ENST00000315554 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms