RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 PAIP2Q9BPZ3 127 aaKnown RBP15.77■□□□□ 0.12
CSNK1D-202ENST00000314028 PANK4Q9NVE7 773 aa15.77■□□□□ 0.12
CSNK1D-202ENST00000314028 BAIAP2L1Q9UHR4 511 aa15.77■□□□□ 0.12
CSNK1D-202ENST00000314028 PCDHA12Q9UN75 941 aa15.77■□□□□ 0.12
CSNK1D-202ENST00000314028 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.12
CSNK1D-202ENST00000314028 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.12
CSNK1D-202ENST00000314028 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 NF2P35240 595 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 UBE4AQ14139 1066 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 USH1GQ495M9 461 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 DDX47Q9H0S4 455 aaKnown RBP15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 SRP68Q9UHB9 627 aaKnown RBP15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 SLC20A2Q08357 652 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 TBC1D10BQ4KMP7 808 aaPredicted RBP15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 CCDC91Q7Z6B0 441 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 SYCP3Q8IZU3 236 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 ARFGAP2Q8N6H7 521 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 TMEM47Q9BQJ4 181 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 EFCC1Q9HA90 598 aa15.77■□□□□ 0.11
CSNK1D-202ENST00000314028 MYO1FO00160 1098 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 PPP1R12BO60237 982 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 IL17AQ16552 155 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 VGLL2Q8N8G2 317 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 TBC1D31Q96DN5 1066 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 FAM53CQ9NYF3 392 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 GSTTP1A0A1W2PQM5 241 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 CLIC2O15247 247 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 ADCY1Q08828 1119 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 PABPC4Q13310 644 aaKnown RBP eCLIP15.76■□□□□ 0.115e-8■□□□□ 8
CSNK1D-202ENST00000314028 MSL1Q68DK7 614 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 EP400NLQ6ZTU2 488 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 RETREG2Q8NC44 543 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 ZIM3Q96PE6 472 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 PCDHA6Q9UN73 950 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 PLAAQ9Y263 795 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 ATP8A1Q9Y2Q0 1164 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 PCDHA8Q9Y5H6 950 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 CORO7P57737 925 aa15.76■□□□□ 0.11
CSNK1D-202ENST00000314028 RGPD2P0DJD1 1756 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 UFL1O94874 794 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 SYF2O95926 243 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 RPSAP08865 295 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 GJC1P36383 396 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 SLCO1A2P46721 670 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 WDR59Q6PJI9 974 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 NOVA2Q9UNW9 492 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 LTN1O94822 1766 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 A0A1W2PQC6 194 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 TCP10Q12799 353 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 WDR93Q6P2C0 686 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 MMS22LQ6ZRQ5 1243 aa15.75■□□□□ 0.11
CSNK1D-202ENST00000314028 ZNF804BA4D1E1 1349 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 EPHB6O15197 1021 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 GCNT3O95395 438 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 FGFR2P21802 821 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 NR2F2P24468 414 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 ARHGAP20Q9P2F6 1191 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 RIC1Q4ADV7 1423 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 ANO9A1A5B4 782 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 BTDP43251 543 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 TTI2Q6NXR4 508 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 APTXQ7Z2E3 356 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 SH3RF1Q7Z6J0 888 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 GIMAP8Q8ND71 665 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 NSUN4Q96CB9 384 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 MRRFQ96E11 262 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
CSNK1D-202ENST00000314028 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 ERVV-1B6SEH8 477 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 E9PMD0 336 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 RFC4P35249 363 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 SNAP25P60880 206 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 FKBP3Q00688 224 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 IFI16Q16666 785 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 KCNK9Q9NPC2 374 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 NAA25Q14CX7 972 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 IRF2BP1Q8IU81 584 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 TSEN2Q8NCE0 465 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 SH2D4AQ9H788 454 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 ZBTB21Q9ULJ3 1066 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 PDS5AQ29RF7 1337 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 MYMKA6NI61 221 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 USP17L5A8MUK1 530 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 KCNQ2O43526 872 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 ACTN1P12814 892 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 TMOD1P28289 359 aa15.73■□□□□ 0.11
CSNK1D-202ENST00000314028 VPS41P49754 854 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms