RNA–Protein interactions for RNA: ENST00000302708.8

ALKBH3-201, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH3, Length 1,474 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-201ENST00000302708 SMCHD1A6NHR9 2005 aa20.21■□□□□ 0.83
ALKBH3-201ENST00000302708 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 SYKP43405 635 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 TRIM60Q495X7 471 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 KIAA1755Q5JYT7 1200 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 PRAMEF19Q5SWL8 479 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 DPP9Q86TI2 863 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 DNAJC25Q9H1X3 360 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 MAD2L2Q9UI95 211 aa20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 SRPRBQ9Y5M8 271 aaKnown RBP20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 ZNFX1Q9P2E3 1918 aaKnown RBP20.2■□□□□ 0.82
ALKBH3-201ENST00000302708 MYH8P13535 1937 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 AP5Z1O43299 807 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 COBLO75128 1261 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 CALML3P27482 149 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 TRAPPC10P48553 1259 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 SLC39A5Q6ZMH5 540 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 LUZP1Q86V48 1076 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 BADQ92934 168 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 CDX2Q99626 313 aaPredicted RBP20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 ZKSCAN5Q9Y2L8 839 aa20.19■□□□□ 0.82
ALKBH3-201ENST00000302708 MPHOSPH10O00566 681 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 ERCC3P19447 782 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 SH3RF1Q7Z6J0 888 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 FERMT2Q96AC1 680 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 BPIFA3Q9BQP9 254 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 SWAP70Q9UH65 585 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 PCDHB6Q9Y5E3 794 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 PARP14Q460N5 1801 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 TOP1P11387 765 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 GALNT17Q6IS24 598 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 SPZ1Q9BXG8 430 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 SPATC1LQ9H0A9 340 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 TUBE1Q9UJT0 475 aa20.18■□□□□ 0.82
ALKBH3-201ENST00000302708 KBTBD13C9JR72 458 aa20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 OLFML2BQ68BL8 750 aa20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 SARM1Q6SZW1 724 aa20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 ARRDC4Q8NCT1 418 aa20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 NAT10Q9H0A0 1025 aaKnown RBP20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 PDLIM7Q9NR12 457 aa20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 KCNH3Q9ULD8 1083 aa20.17■□□□□ 0.82
ALKBH3-201ENST00000302708 IGKV6D-41A0A0C4DH26 115 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 hCG_1642624A0A1W2PR95 340 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 TPM3P06753 285 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 ADCYAP1R1P41586 468 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 PLS1Q14651 629 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 COG2Q14746 738 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 C11orf57Q6ZUT1 292 aaPredicted RBP20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 CEP57L1Q8IYX8 460 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 DAGLBQ8NCG7 672 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 MYLIPQ8WY64 445 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 CLIC6Q96NY7 704 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 TTYH1Q9H313 450 aaPredicted RBP20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 FAM13BQ9NYF5 915 aa20.16■□□□□ 0.82
ALKBH3-201ENST00000302708 SEPT4O43236 478 aa20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 ZNF500O60304 480 aaPredicted RBP20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 MSNP26038 577 aaKnown RBP20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 NLRP12P59046 1061 aa20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 NLRP5P59047 1200 aa20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 SPICE1Q8N0Z3 855 aa20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 MAFAQ8NHW3 353 aaPredicted RBP20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 STX8Q9UNK0 236 aa20.15■□□□□ 0.82
ALKBH3-201ENST00000302708 MUC3AQ02505 3323 aa20.14■□□□□ 0.82
ALKBH3-201ENST00000302708 ITGB8P26012 769 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 SNX17Q15036 470 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 LRRC41Q15345 812 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 SLC35G1Q2M3R5 365 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 EARS2Q5JPH6 523 aaKnown RBP20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 KRBA2Q6ZNG9 492 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 NCAPG2Q86XI2 1143 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 ATG4CQ96DT6 458 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 HOXC10Q9NYD6 342 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 PLXNA1Q9UIW2 1896 aa20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 GREB1LQ9C091 1923 aaPredicted RBP20.14■□□□□ 0.81
ALKBH3-201ENST00000302708 M0R2N6 131 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 CYTH3O43739 400 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 PTMAP06454 111 aaKnown RBP20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 CCDC148Q8NFR7 591 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 CEP95Q96GE4 821 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 MTMR4Q9NYA4 1195 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 PCDHA4Q9UN74 947 aa20.13■□□□□ 0.81
ALKBH3-201ENST00000302708 FAM205CA6NFA0 338 aa20.12■□□□□ 0.81
ALKBH3-201ENST00000302708 KLRF2D3W0D1 207 aa20.12■□□□□ 0.81
ALKBH3-201ENST00000302708 GOLGA6L19H0YKK7 550 aa20.12■□□□□ 0.81
ALKBH3-201ENST00000302708 STRNO43815 780 aa20.12■□□□□ 0.81
ALKBH3-201ENST00000302708 FLOT1O75955 427 aa20.12■□□□□ 0.81
ALKBH3-201ENST00000302708 PARP1P09874 1014 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms