RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MTMR9Q96QG7 549 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 PLAGL2Q9UPG8 496 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 LEMD3Q9Y2U8 911 aa27.09■■□□□ 1.93
SPTSSA-201ENST00000298130 RHBDL3P58872 404 aa27.08■■□□□ 1.93
SPTSSA-201ENST00000298130 ARID5AQ03989 594 aa27.08■■□□□ 1.93
SPTSSA-201ENST00000298130 CKAP4Q07065 602 aaKnown RBP27.08■■□□□ 1.93
SPTSSA-201ENST00000298130 NELFCDQ8IXH7 590 aa27.08■■□□□ 1.93
SPTSSA-201ENST00000298130 CNBD1Q8NA66 436 aa27.08■■□□□ 1.93
SPTSSA-201ENST00000298130 PURBQ96QR8 312 aaKnown RBP27.08■■□□□ 1.92
SPTSSA-201ENST00000298130 SNX12Q9UMY4 172 aa27.08■■□□□ 1.92
SPTSSA-201ENST00000298130 COL5A3P25940 1745 aaPredicted RBP27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 MYH10P35580 1976 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 AKR1B1P15121 316 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 CCNI2Q6ZMN8 369 aaPredicted RBP27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 UNC13DQ70J99 1090 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 MS4A14Q96JA4 679 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 SH2D4AQ9H788 454 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 NPHP3-ACAD11A0A0J9YXS1 232 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 TDRD12Q587J7 1177 aaKnown RBP27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 MAGEF1Q9HAY2 307 aa27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 FEZ2Q9UHY8 353 aaPredicted RBP27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 ZC3H4Q9UPT8 1303 aaKnown RBP27.07■■□□□ 1.92
SPTSSA-201ENST00000298130 DPP8Q6V1X1 898 aaPredicted RBP27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 CACNA2D4Q7Z3S7 1137 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 RSPH14Q9UHP6 348 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 GPR75-ASB3A0A0A6YYF3 556 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 MARCH6O60337 910 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 SLC1A4P43007 532 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 ADCY7P51828 1080 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 ZNF287Q9HBT7 754 aa27.06■■□□□ 1.92
SPTSSA-201ENST00000298130 VGLL3A8MV65 326 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 RIMBP2O15034 1052 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 USO1O60763 962 aaKnown RBP27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 TACC1O75410 805 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 MAGEA1P43355 309 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 RNASE9P60153 205 aaKnown RBP27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 LRRC31Q6UY01 552 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 SND1Q7KZF4 910 aaKnown RBP eCLIP27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 MXD3Q9BW11 206 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 AGPSO00116 658 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 MYO1CO00159 1063 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 MAN2A1Q16706 1144 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 RAD54LQ92698 747 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 ACBD3Q9H3P7 528 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 EP400Q96L91 3159 aa27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 TNRC6CQ9HCJ0 1690 aaKnown RBP27.05■■□□□ 1.92
SPTSSA-201ENST00000298130 PPP1R11O60927 126 aaPredicted RBP27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 DNAAF5Q86Y56 855 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 RPGRQ92834 1020 aaKnown RBP27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 MTMR8Q96EF0 704 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 OSBPL9Q96SU4 736 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 PRPF6O94906 941 aaKnown RBP27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 TMEM266Q2M3C6 531 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 LRRC55Q6ZSA7 311 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 FAM196AQ6ZSG2 479 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 MED4Q9NPJ6 270 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 JRKLQ9Y4A0 524 aa27.04■■□□□ 1.92
SPTSSA-201ENST00000298130 A0A1W2PQJ5 194 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 TRAF5O00463 557 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 TUBBP07437 444 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 KCNMA1Q12791 1236 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 MAP9Q49MG5 647 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 KRT79Q5XKE5 535 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 TTC19Q6DKK2 380 aaPredicted RBP27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 KCTD1Q719H9 257 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 SPATA4Q8NEY3 305 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 TRIM58Q8NG06 486 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 AFAP1L1Q8TED9 768 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 BAP1Q92560 729 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 NGLY1Q96IV0 654 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 ZHX3Q9H4I2 956 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 POLD4Q9HCU8 107 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 FAM170AA1A519 330 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 E9PMD0 336 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 PTPROQ16827 1216 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 RIOX1Q9H6W3 641 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 RRP15Q9Y3B9 282 aaKnown RBP27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 MYH1P12882 1939 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 ANO9A1A5B4 782 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 C6orf229H3BNL8 230 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 DNAJC21Q5F1R6 531 aaKnown RBP27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 ZNF662Q6ZS27 426 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 EHD4Q9H223 541 aa27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 PACSIN2Q9UNF0 486 aaPredicted RBP27.03■■□□□ 1.92
SPTSSA-201ENST00000298130 GTF2IP78347 998 aa27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 TRAPPC3LQ5T215 181 aa27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 GOLGA6L1Q8N7Z2 621 aa27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 MTMR4Q9NYA4 1195 aa27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 CWC15Q9P013 229 aaKnown RBP27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 POLLQ9UGP5 575 aa27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 FIGNQ5HY92 759 aa27.02■■□□□ 1.92
SPTSSA-201ENST00000298130 CCDC40Q4G0X9 1142 aa27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 CCDC181Q5TID7 509 aa27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 PRR5LQ6MZQ0 368 aa27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 GUF1Q8N442 669 aaKnown RBP27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 TARSL2A2RTX5 802 aaKnown RBP27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 RC3H1Q5TC82 1133 aaKnown RBP27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 SRLQ86TD4 932 aa27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 ADGRF4Q8IZF3 695 aa27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 HAS1Q92839 578 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms