RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CCDC62Q6P9F0 684 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 SAMD3Q8N6K7 520 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 PPP1R13LQ8WUF5 828 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
TPM1-202ENST00000288398 GCOM1H8Y6P7 765 aaPredicted RBP16.29■□□□□ 0.2
TPM1-202ENST00000288398 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 WTAPQ15007 396 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 CCDC85BQ15834 202 aaPredicted RBP16.29■□□□□ 0.2
TPM1-202ENST00000288398 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 CYB5R4Q7L1T6 521 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 NCOA7Q8NI08 942 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
TPM1-202ENST00000288398 YBX2Q9Y2T7 364 aaKnown RBP16.29■□□□□ 0.2
TPM1-202ENST00000288398 GSPT1P15170 499 aaKnown RBP16.28■□□□□ 0.2
TPM1-202ENST00000288398 CCND2P30279 289 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 HSD17B4P51659 736 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 SEC23AQ15436 765 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 MICALL1Q8N3F8 863 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 PPTC7Q8NI37 304 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 PHOSPHO2Q8TCD6 241 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 ALG1Q9BT22 464 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 THEGQ9P2T0 379 aa16.28■□□□□ 0.2
TPM1-202ENST00000288398 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
TPM1-202ENST00000288398 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.2
TPM1-202ENST00000288398 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.2
TPM1-202ENST00000288398 BAIAP3O94812 1187 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 PARNO95453 639 aaKnown RBP16.27■□□□□ 0.2
TPM1-202ENST00000288398 CYP21A2P08686 494 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 SELPP16109 830 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 CHMLP26374 656 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 PDE4AP27815 886 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
TPM1-202ENST00000288398 PSEN2P49810 448 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 GRM4Q14833 912 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 SESTD1Q86VW0 696 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 FCHSD1Q86WN1 690 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
TPM1-202ENST00000288398 SPATA33Q96N06 139 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 PIGSQ96S52 555 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
TPM1-202ENST00000288398 SCN10AQ9Y5Y9 1956 aa16.27■□□□□ 0.19
TPM1-202ENST00000288398 MYH6P13533 1939 aa16.27■□□□□ 0.19
TPM1-202ENST00000288398 MYOGP15173 224 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 MFSD10Q14728 455 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 SKIV2LQ15477 1246 aaKnown RBP16.26■□□□□ 0.19
TPM1-202ENST00000288398 GNPTABQ3T906 1256 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 GDF6Q6KF10 455 aaPredicted RBP16.26■□□□□ 0.19
TPM1-202ENST00000288398 LRRC8DQ7L1W4 858 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 ATXN2LQ8WWM7 1075 aaKnown RBP16.26■□□□□ 0.19
TPM1-202ENST00000288398 ZBED2Q9BTP6 218 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 IL25Q9H293 177 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
TPM1-202ENST00000288398 EYSQ5T1H1 3165 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 E7EWF7 191 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 SORBS3O60504 671 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 GGPS1O95749 300 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 CA3P07451 260 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 ZNF286BP0CG31 522 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 KIF5BP33176 963 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 PTH1RQ03431 593 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 PGM5Q15124 567 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
TPM1-202ENST00000288398 CUL5Q93034 780 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 MTMR8Q96EF0 704 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 HDAC6Q9UBN7 1215 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
TPM1-202ENST00000288398 GTF2IRD1Q9UHL9 959 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 CDH23Q9H251 3354 aa16.25■□□□□ 0.19
TPM1-202ENST00000288398 NOP56O00567 594 aaKnown RBP16.24■□□□□ 0.19
TPM1-202ENST00000288398 TLL1O43897 1013 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
TPM1-202ENST00000288398 PPFIA4O75335 1185 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 F2P00734 622 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 TGFB3P10600 412 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 IRX6P78412 446 aaPredicted RBP16.24■□□□□ 0.19
TPM1-202ENST00000288398 MRPS5P82675 430 aaKnown RBP16.24■□□□□ 0.19
TPM1-202ENST00000288398 GHRHRQ02643 423 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 ADGRE1Q14246 886 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 NFXL1Q6ZNB6 911 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 VSIG10LQ86VR7 867 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 HERC6Q8IVU3 1022 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 KAT2BQ92831 832 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
TPM1-202ENST00000288398 OPLAHO14841 1288 aa16.23■□□□□ 0.19
TPM1-202ENST00000288398 SGSM2O43147 1006 aa16.23■□□□□ 0.19
TPM1-202ENST00000288398 EFCAB14O75071 495 aa16.23■□□□□ 0.19
TPM1-202ENST00000288398 PTK7Q13308 1070 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms