RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
PDE6D-201ENST00000287600 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
PDE6D-201ENST00000287600 PFKMP08237 780 aa17.68■□□□□ 0.42
PDE6D-201ENST00000287600 TTLL4Q14679 1199 aa17.68■□□□□ 0.42
PDE6D-201ENST00000287600 TSGA10IPQ3SY00 556 aa17.68■□□□□ 0.42
PDE6D-201ENST00000287600 DEFB128Q7Z7B8 93 aa17.68■□□□□ 0.42
PDE6D-201ENST00000287600 YBX2Q9Y2T7 364 aaKnown RBP17.68■□□□□ 0.42
PDE6D-201ENST00000287600 ABCB11O95342 1321 aa17.68■□□□□ 0.42
PDE6D-201ENST00000287600 VCANP13611 3396 aa17.68■□□□□ 0.42
PDE6D-201ENST00000287600 KPNA6O60684 536 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 IGFBP4P22692 258 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 HSPA4P34932 840 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 RABGGTBP53611 331 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 CHMP4BP1P59074 171 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 KRT32Q14532 448 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 NBPF20Q3BBV1 942 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 PPP2R2DQ66LE6 453 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 STAG2Q8N3U4 1231 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 PPP1R13LQ8WUF5 828 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 TMEM87BQ96K49 555 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 MTA3Q9BTC8 594 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 VAT1LQ9HCJ6 419 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 PRDM6Q9NQX0 595 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 NOD1Q9Y239 953 aa17.67■□□□□ 0.42
PDE6D-201ENST00000287600 A6NJR5 290 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 KLRF2D3W0D1 207 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 SH2B2O14492 632 aaPredicted RBP17.66■□□□□ 0.42
PDE6D-201ENST00000287600 ARIH2O95376 493 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 ATP2A2P16615 1042 aaKnown RBP17.66■□□□□ 0.42
PDE6D-201ENST00000287600 TROAPQ12815 778 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 TJAP1Q5JTD0 557 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 NFRKBQ6P4R8 1299 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 NFXL1Q6ZNB6 911 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 ADGRF4Q8IZF3 695 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 TMTC2Q8N394 836 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 LRRC2Q9BYS8 371 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 KIAA1217Q5T5P2 1943 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 PRUNE2Q8WUY3 3088 aa17.66■□□□□ 0.42
PDE6D-201ENST00000287600 PALM3A6NDB9 673 aaPredicted RBP17.65■□□□□ 0.42
PDE6D-201ENST00000287600 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 ACTN1P12814 892 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 GRM4Q14833 912 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 QRICH1Q2TAL8 776 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 SEPT14Q6ZU15 432 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 DHX32Q7L7V1 743 aaKnown RBP17.65■□□□□ 0.42
PDE6D-201ENST00000287600 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 KCNB2Q92953 911 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 THEGQ9P2T0 379 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 PCDHA11Q9Y5I1 949 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
PDE6D-201ENST00000287600 EPB41L2O43491 1005 aaKnown RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 MYOGP15173 224 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 RFC2P35250 354 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 EXOSC10Q01780 885 aaKnown RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 CCDC85BQ15834 202 aaPredicted RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 ZNF654Q8IZM8 581 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 RETREG2Q8NC44 543 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 SYTL5Q8TDW5 730 aaPredicted RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 NSUN6Q8TEA1 469 aaKnown RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 TBC1D5Q92609 795 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 VWCEQ96DN2 955 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 MYL10Q9BUA6 226 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 MAF1Q9H063 256 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 JMJD4Q9H9V9 463 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 COL20A1Q9P218 1284 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 MRPL11Q9Y3B7 192 aaKnown RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
PDE6D-201ENST00000287600 SPTBN5Q9NRC6 3674 aaKnown RBP17.64■□□□□ 0.41
PDE6D-201ENST00000287600 GH1P01241 217 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 MMP3P08254 477 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 HMGB1P09429 215 aaKnown RBP17.63■□□□□ 0.41
PDE6D-201ENST00000287600 LIFRP42702 1097 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 BFSP2Q13515 415 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 STXBP2Q15833 593 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 FBXO11Q86XK2 927 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
PDE6D-201ENST00000287600 RMDN3Q96TC7 470 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
PDE6D-201ENST00000287600 DDAH1O94760 285 aa17.62■□□□□ 0.41
PDE6D-201ENST00000287600 IQCF3P0C7M6 154 aa17.62■□□□□ 0.41
PDE6D-201ENST00000287600 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
PDE6D-201ENST00000287600 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
PDE6D-201ENST00000287600 CCDC155Q8N6L0 562 aa17.62■□□□□ 0.41
PDE6D-201ENST00000287600 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
PDE6D-201ENST00000287600 IWS1Q96ST2 819 aa17.62■□□□□ 0.41
PDE6D-201ENST00000287600 SLC9A7Q96T83 725 aa17.62■□□□□ 0.41
PDE6D-201ENST00000287600 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
PDE6D-201ENST00000287600 SLC12A7Q9Y666 1083 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms