RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PTPRFP10586 1907 aa23.58■■□□□ 1.37
YBX3-202ENST00000279550 TRAF1Q13077 416 aa23.58■■□□□ 1.37
YBX3-202ENST00000279550 CCDC174Q6PII3 467 aa23.58■■□□□ 1.37
YBX3-202ENST00000279550 SAMSN1Q9NSI8 373 aaKnown RBP23.58■■□□□ 1.37
YBX3-202ENST00000279550 INTS13Q9NVM9 706 aa23.58■■□□□ 1.37
YBX3-202ENST00000279550 MEIS2O14770 477 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 SERPINC1P01008 464 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 FXR2P51116 673 aaKnown RBP eCLIP23.57■■□□□ 1.36
YBX3-202ENST00000279550 STX17P56962 302 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 UBASH3AP57075 661 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 CST9Q5W186 159 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 PPP4R3AQ6IN85 833 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 CATSPERGQ6ZRH7 1159 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 LRRC8AQ8IWT6 810 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 PROCA1Q8NCQ7 364 aaPredicted RBP23.57■■□□□ 1.36
YBX3-202ENST00000279550 ANO3Q9BYT9 981 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 SLC38A10Q9HBR0 1119 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 KBTBD4Q9NVX7 518 aa23.57■■□□□ 1.36
YBX3-202ENST00000279550 CT47A1Q5JQC4 288 aaPredicted RBP23.56■■□□□ 1.36
YBX3-202ENST00000279550 GLT8D2Q9H1C3 349 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 SYNRGQ9UMZ2 1314 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 KLRC4O43908 158 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 GJA5P36382 358 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 COG2Q14746 738 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 TREML2Q5T2D2 321 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 HAS1Q92839 578 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 DDX25Q9UHL0 483 aaKnown RBP23.56■■□□□ 1.36
YBX3-202ENST00000279550 CTNND2Q9UQB3 1225 aa23.56■■□□□ 1.36
YBX3-202ENST00000279550 ZNF536O15090 1300 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 OPLAHO14841 1288 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 COBLO75128 1261 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 ICAM1P05362 532 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 FDX1P10109 184 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 GRB10Q13322 594 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 PTPN21Q16825 1174 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 SPATA1Q5VX52 437 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.55■■□□□ 1.36
YBX3-202ENST00000279550 GJA10Q969M2 543 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 ATG4CQ96DT6 458 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 PNMA5Q96PV4 448 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 IMPACTQ9P2X3 320 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 LRWD1Q9UFC0 647 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 GDAQ9Y2T3 454 aa23.55■■□□□ 1.36
YBX3-202ENST00000279550 PARP14Q460N5 1801 aa23.54■■□□□ 1.36
YBX3-202ENST00000279550 VWA5AO00534 786 aa23.54■■□□□ 1.36
YBX3-202ENST00000279550 CBFA2T2O43439 604 aa23.54■■□□□ 1.36
YBX3-202ENST00000279550 GADL1Q6ZQY3 521 aa23.54■■□□□ 1.36
YBX3-202ENST00000279550 LOC285556D6RIA3 1793 aa23.54■■□□□ 1.36
YBX3-202ENST00000279550 POTEMA6NI47 508 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 DSG3P32926 999 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 CCZ1BP86790 482 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 CCZ1P86791 482 aaPredicted RBP23.53■■□□□ 1.36
YBX3-202ENST00000279550 ZNF658Q5TYW1 1059 aaPredicted RBP23.53■■□□□ 1.36
YBX3-202ENST00000279550 CUEDC2Q9H467 287 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 RMND1Q9NWS8 449 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 CCPG1Q9ULG6 757 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 ADAMTS5Q9UNA0 930 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 RLFQ13129 1914 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 MYPNQ86TC9 1320 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 ZBED4O75132 1171 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 GCFC2P16383 781 aaKnown RBP23.53■■□□□ 1.36
YBX3-202ENST00000279550 TMEM266Q2M3C6 531 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 KMT5BQ4FZB7 885 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 ARMCX5Q6P1M9 558 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 WNK4Q96J92 1243 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 AGBL1Q96MI9 1066 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 NUDT12Q9BQG2 462 aa23.53■■□□□ 1.36
YBX3-202ENST00000279550 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
YBX3-202ENST00000279550 KIF3CO14782 793 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 HOXA7P31268 230 aaPredicted RBP23.52■■□□□ 1.36
YBX3-202ENST00000279550 GSDMDP57764 484 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 SNAPC2Q13487 334 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 VSTM4Q8IW00 320 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 CPXCR1Q8N123 301 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 CRYGNQ8WXF5 182 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 MBOAT7Q96N66 472 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 UIMC1Q96RL1 719 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 MAGEF1Q9HAY2 307 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 BLOC1S4Q9NUP1 217 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 HOXC10Q9NYD6 342 aa23.52■■□□□ 1.36
YBX3-202ENST00000279550 MRPL11Q9Y3B7 192 aaKnown RBP23.52■■□□□ 1.36
YBX3-202ENST00000279550 ABCB11O95342 1321 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 AP3B2Q13367 1082 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 MOGSQ13724 837 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 PDIA5Q14554 519 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 CDKAL1Q5VV42 579 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 FASTKD5Q7L8L6 764 aaKnown RBP23.51■■□□□ 1.35
YBX3-202ENST00000279550 CALML4Q96GE6 196 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 RAVER2Q9HCJ3 691 aaKnown RBP23.51■■□□□ 1.35
YBX3-202ENST00000279550 AGTPBP1Q9UPW5 1226 aa23.51■■□□□ 1.35
YBX3-202ENST00000279550 SPDYE16A6NNV3 312 aaPredicted RBP23.5■■□□□ 1.35
YBX3-202ENST00000279550 CDK11BP21127 795 aaKnown RBP23.5■■□□□ 1.35
YBX3-202ENST00000279550 KCNB1Q14721 858 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 APTXQ7Z2E3 356 aaKnown RBP23.5■■□□□ 1.35
YBX3-202ENST00000279550 REPS2Q8NFH8 660 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 TRPM7Q96QT4 1865 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 CYP3A7-CYP3A51PA0A087WV96 503 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 SMCHD1A6NHR9 2005 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 MYL1P05976 194 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 CYP3A7P24462 503 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms