RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 SCLYQ96I15 445 aa17.15■□□□□ 0.34
RPS3-201ENST00000278572 PIGSQ96S52 555 aa17.15■□□□□ 0.34
RPS3-201ENST00000278572 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
RPS3-201ENST00000278572 MSRAQ9UJ68 235 aa17.15■□□□□ 0.34
RPS3-201ENST00000278572 DDX41Q9UJV9 622 aaKnown RBP17.15■□□□□ 0.34
RPS3-201ENST00000278572 PNMA6FA0A0J9YX94 578 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 DDAH1O94760 285 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 RFC2P35250 354 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 ANTXR2P58335 489 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 CHMP4BP1P59074 171 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 BFSP2Q13515 415 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 LAMC2Q13753 1193 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 GRIN2CQ14957 1233 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 DGKDQ16760 1214 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 CCDC155Q8N6L0 562 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
RPS3-201ENST00000278572 MAP3K14Q99558 947 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 KATNAL1Q9BW62 490 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 SENP2Q9HC62 589 aa17.14■□□□□ 0.33
RPS3-201ENST00000278572 CXXC1Q9P0U4 656 aaPredicted RBP17.14■□□□□ 0.33
RPS3-201ENST00000278572 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
RPS3-201ENST00000278572 HOXA13P31271 388 aaPredicted RBP17.13■□□□□ 0.33
RPS3-201ENST00000278572 KIF5BP33176 963 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 SLC35G1Q2M3R5 365 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 PPTC7Q8NI37 304 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
RPS3-201ENST00000278572 CYTH3O43739 400 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 ACTN1P12814 892 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 CCND2P30279 289 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 MCM5P33992 734 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 PBX2P40425 430 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 PGM5Q15124 567 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 PTGISQ16647 500 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 VSIG10LQ86VR7 867 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
RPS3-201ENST00000278572 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 IGDCC4Q8TDY8 1250 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
RPS3-201ENST00000278572 EYSQ5T1H1 3165 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 PRC1O43663 620 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 GNPTABQ3T906 1256 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 DEFB128Q7Z7B8 93 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 ZNF654Q8IZM8 581 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 TMTC2Q8N394 836 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 PPP1R13LQ8WUF5 828 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 KAT2BQ92831 832 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 TMEM87BQ96K49 555 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
RPS3-201ENST00000278572 LZTS2Q9BRK4 669 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 ESYT1Q9BSJ8 1104 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 SPZ1Q9BXG8 430 aa17.11■□□□□ 0.33
RPS3-201ENST00000278572 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
RPS3-201ENST00000278572 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
RPS3-201ENST00000278572 VCANP13611 3396 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 RGS20O76081 388 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 F2P00734 622 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 IQCF3P0C7M6 154 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 TGFB3P10600 412 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 ATP2A2P16615 1042 aaKnown RBP17.1■□□□□ 0.33
RPS3-201ENST00000278572 GNAQP50148 359 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 RRP36Q96EU6 259 aaKnown RBP17.1■□□□□ 0.33
RPS3-201ENST00000278572 SLC28A3Q9HAS3 691 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 ANO2Q9NQ90 1003 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 GTF2IRD1Q9UHL9 959 aa17.1■□□□□ 0.33
RPS3-201ENST00000278572 CHD9Q3L8U1 2897 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
RPS3-201ENST00000278572 SLC27A2O14975 620 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 STAM2O75886 525 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 GGPS1O95749 300 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
RPS3-201ENST00000278572 UBA1P22314 1058 aaKnown RBP17.09■□□□□ 0.33
RPS3-201ENST00000278572 SMARCA1P28370 1054 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 PSEN2P49810 448 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
RPS3-201ENST00000278572 GDF6Q6KF10 455 aaPredicted RBP17.09■□□□□ 0.33
RPS3-201ENST00000278572 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 VWCEQ96DN2 955 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 MYL10Q9BUA6 226 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPS3-201ENST00000278572 NKX2-4Q9H2Z4 354 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 PCDHA11Q9Y5I1 949 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 TTC28Q96AY4 2481 aa17.09■□□□□ 0.33
RPS3-201ENST00000278572 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
RPS3-201ENST00000278572 PARNO95453 639 aaKnown RBP17.08■□□□□ 0.32
RPS3-201ENST00000278572 ZNF286BP0CG31 522 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms