RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PPP4R3AQ6IN85 833 aa19.58■□□□□ 0.73
SKP2-201ENST00000274254 MPHOSPH6Q99547 160 aaKnown RBP19.58■□□□□ 0.73
SKP2-201ENST00000274254 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.73
SKP2-201ENST00000274254 FAM86B1E9PN63 330 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 FAM86B2P0C5J1 330 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
SKP2-201ENST00000274254 GCFC2P16383 781 aaKnown RBP19.57■□□□□ 0.72
SKP2-201ENST00000274254 STXBP2Q15833 593 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 TTC38Q5R3I4 469 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 ARMCX2Q7L311 632 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 MBOAT7Q96N66 472 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 FLRT1Q9NZU1 646 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 PCDHB6Q9Y5E3 794 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 UBIAD1Q9Y5Z9 338 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 SYNGAP1Q96PV0 1343 aa19.57■□□□□ 0.72
SKP2-201ENST00000274254 EIF3JO75822 258 aaKnown RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 STAM2O75886 525 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 TDP2O95551 362 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 PRMT2P55345 433 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 PDE4DQ08499 809 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 NBR1Q14596 966 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 CCL14Q16627 93 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 CEP55Q53EZ4 464 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 OTOP1Q7RTM1 612 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 NAP1L4Q99733 375 aaKnown RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 TINF2Q9BSI4 451 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 IGLV3-22A0A075B6J6 115 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 CCNT1O60563 726 aaKnown RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 ITGB5P18084 799 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 ATP2B1P20020 1258 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 CTCFP49711 727 aaPredicted RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 ORC2Q13416 577 aaPredicted RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 CYP2W1Q8TAV3 490 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 LENG9Q96B70 501 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 INPP4AQ96PE3 977 aaPredicted RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 MXRA8Q9BRK3 442 aa19.56■□□□□ 0.72
SKP2-201ENST00000274254 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.56■□□□□ 0.72
SKP2-201ENST00000274254 MEIS1O00470 390 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 RGS20O76081 388 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 SNAI1O95863 264 aaPredicted RBP19.55■□□□□ 0.72
SKP2-201ENST00000274254 ZNF76P36508 570 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 DNM1Q05193 864 aaKnown RBP19.55■□□□□ 0.72
SKP2-201ENST00000274254 FOXD4L6Q3SYB3 417 aaPredicted RBP19.55■□□□□ 0.72
SKP2-201ENST00000274254 Q4G0T1 1027 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 ATL3Q6DD88 541 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 FOXD4L3Q6VB84 417 aaPredicted RBP19.55■□□□□ 0.72
SKP2-201ENST00000274254 NIPA1Q7RTP0 329 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 ZFP91Q96JP5 570 aaPredicted RBP19.55■□□□□ 0.72
SKP2-201ENST00000274254 USP28Q96RU2 1077 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 FTOQ9C0B1 505 aaKnown RBP eCLIP19.55■□□□□ 0.72
SKP2-201ENST00000274254 JADE2Q9NQC1 790 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 RTEL1Q9NZ71 1219 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 TRIM17Q9Y577 477 aa19.55■□□□□ 0.72
SKP2-201ENST00000274254 SLC37A4O43826 429 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 MCM7P33993 719 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 ZNF174Q15697 407 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 TRIB2Q92519 343 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 TNPO1Q92973 898 aaKnown RBP19.54■□□□□ 0.72
SKP2-201ENST00000274254 ZNF396Q96N95 335 aaPredicted RBP19.54■□□□□ 0.72
SKP2-201ENST00000274254 KATNBL1Q9H079 304 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 POLR3EQ9NVU0 708 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.54■□□□□ 0.72
SKP2-201ENST00000274254 DDX25Q9UHL0 483 aaKnown RBP19.54■□□□□ 0.72
SKP2-201ENST00000274254 TCHHQ07283 1943 aa19.54■□□□□ 0.72
SKP2-201ENST00000274254 KIAA1217Q5T5P2 1943 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 LBX1P52954 281 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 SETQ01105 290 aaPredicted RBP19.53■□□□□ 0.72
SKP2-201ENST00000274254 PRR16Q569H4 304 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 ANO1Q5XXA6 986 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 TRMT44Q8IYL2 757 aaKnown RBP19.53■□□□□ 0.72
SKP2-201ENST00000274254 GPRASP2Q96D09 838 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 CHAMP1Q96JM3 812 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 WDR11Q9BZH6 1224 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 CLIC4Q9Y696 253 aa19.53■□□□□ 0.72
SKP2-201ENST00000274254 NEMFO60524 1076 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 NASPP49321 788 aaPredicted RBP19.52■□□□□ 0.72
SKP2-201ENST00000274254 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
SKP2-201ENST00000274254 EEPD1Q7L9B9 569 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 PLA2G4DQ86XP0 818 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 C4orf32Q8N8J7 132 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 RAET1EQ8TD07 263 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 PXYLP1Q8TE99 480 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 ABHD16BQ9H3Z7 469 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 VTA1Q9NP79 307 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 TFIP11Q9UBB9 837 aaKnown RBP19.52■□□□□ 0.72
SKP2-201ENST00000274254 HTTP42858 3142 aa19.52■□□□□ 0.72
SKP2-201ENST00000274254 ICAM3P32942 547 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 CYP2C19P33261 490 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 SEMA3FQ13275 785 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 MTMR1Q13613 665 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 PTPAQ15257 358 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 GNPTABQ3T906 1256 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 NLRX1Q86UT6 975 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 FBXO16Q8IX29 292 aaPredicted RBP19.51■□□□□ 0.71
SKP2-201ENST00000274254 TMEM60Q9H2L4 133 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 KCNMB3Q9NPA1 279 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 KCNH7Q9NS40 1196 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 CFAP45Q9UL16 551 aa19.51■□□□□ 0.71
SKP2-201ENST00000274254 MAFGO15525 162 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms