RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 AP5M1Q9H0R1 490 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 TOMM22Q9NS69 142 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 PTPRSQ13332 1948 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 WDR19Q8NEZ3 1342 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 TANC1Q9C0D5 1861 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 EPOPA6NHQ4 379 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 SDSP20132 328 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 GPNMBQ14956 572 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 RNF207Q6ZRF8 634 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 SPRED2Q7Z698 418 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 TNKSO95271 1327 aa10.53□□□□□ -0.72
TPM3-201ENST00000271850 LOC102724159A0A0B4J2E5 919 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 A6NJR5 290 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 BHMG1C9JSJ3 638 aaPredicted RBP10.52□□□□□ -0.73
TPM3-201ENST00000271850 OPLAHO14841 1288 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 FGBP02675 491 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 PWP2Q15269 919 aaKnown RBP10.52□□□□□ -0.73
TPM3-201ENST00000271850 TCTN1Q2MV58 587 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 CCDC62Q6P9F0 684 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 KAT2BQ92831 832 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 TTC14Q96N46 770 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
TPM3-201ENST00000271850 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 RFXAPO00287 272 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 ZEB2O60315 1214 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 MYL3P08590 195 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 NUCB1Q02818 461 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
TPM3-201ENST00000271850 USH1GQ495M9 461 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 TJAP1Q5JTD0 557 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 MFSD6Q6ZSS7 791 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 ENAHQ8N8S7 591 aaPredicted RBP10.51□□□□□ -0.73
TPM3-201ENST00000271850 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
TPM3-201ENST00000271850 PPM1EQ8WY54 764 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 DHX38Q92620 1227 aaKnown RBP10.51□□□□□ -0.73
TPM3-201ENST00000271850 ANKS1AQ92625 1134 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 TAAR1Q96RJ0 339 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 ADD3Q9UEY8 706 aaKnown RBP10.51□□□□□ -0.73
TPM3-201ENST00000271850 BDP1A6H8Y1 2624 aa10.51□□□□□ -0.73
TPM3-201ENST00000271850 NCOR1O75376 2440 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 PRRC2BQ5JSZ5 2229 aaKnown RBP10.5□□□□□ -0.73
TPM3-201ENST00000271850 B4E1Z4 1266 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 PPP1R11O60927 126 aaPredicted RBP10.5□□□□□ -0.73
TPM3-201ENST00000271850 KDM4AO75164 1064 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 HIC1Q14526 733 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 PPP2R5BQ15173 497 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 RAB30Q15771 203 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 CCDC85BQ15834 202 aaPredicted RBP10.5□□□□□ -0.73
TPM3-201ENST00000271850 LY6KQ17RY6 165 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 QRICH1Q2TAL8 776 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 CWC27Q6UX04 472 aaKnown RBP10.5□□□□□ -0.73
TPM3-201ENST00000271850 DEFB128Q7Z7B8 93 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 CHD1LQ86WJ1 897 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 DGKHQ86XP1 1220 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 ADGRF4Q8IZF3 695 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 PNMA1Q8ND90 353 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 RGS22Q8NE09 1264 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 DNERQ8NFT8 737 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 MTG1Q9BT17 334 aaPredicted RBP10.5□□□□□ -0.73
TPM3-201ENST00000271850 SEZ6LQ9BYH1 1024 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 TAF6LQ9Y6J9 622 aa10.5□□□□□ -0.73
TPM3-201ENST00000271850 KIAA1217Q5T5P2 1943 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 MMP3P08254 477 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 IQCF3P0C7M6 154 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 TXNP10599 105 aaKnown RBP10.49□□□□□ -0.73
TPM3-201ENST00000271850 PCP11498 1178 aaKnown RBP10.49□□□□□ -0.73
TPM3-201ENST00000271850 PDE4AP27815 886 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 CPT1AP50416 773 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 FOSBP53539 338 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 PDE4DQ08499 809 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 GPATCH4Q5T3I0 446 aaKnown RBP10.49□□□□□ -0.73
TPM3-201ENST00000271850 KRT40Q6A162 431 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 GDF6Q6KF10 455 aaPredicted RBP10.49□□□□□ -0.73
TPM3-201ENST00000271850 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 TRAF7Q6Q0C0 670 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 EXOC6Q8TAG9 804 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 SCFD2Q8WU76 684 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 AFG1LQ8WV93 481 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 ESR2Q92731 530 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 WNT8BQ93098 351 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
TPM3-201ENST00000271850 ZBED2Q9BTP6 218 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 JMJD4Q9H9V9 463 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 SENP2Q9HC62 589 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 ZSWIM5Q9P217 1185 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 MSRAQ9UJ68 235 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 SLC4A7Q9Y6M7 1214 aa10.49□□□□□ -0.73
TPM3-201ENST00000271850 TRIP12Q14669 1992 aaPredicted RBP10.48□□□□□ -0.73
TPM3-201ENST00000271850 ZBBXA8MT70 800 aa10.48□□□□□ -0.73
TPM3-201ENST00000271850 NKRFO15226 690 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM3-201ENST00000271850 CA3P07451 260 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms