RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 GRK4P32298 578 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 ICAM3P32942 547 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 ARHGAP4P98171 946 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 GUCY1B3Q02153 619 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
SSBP1-201ENST00000265304 NONOQ15233 471 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP1-201ENST00000265304 STXBP2Q15833 593 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 EARS2Q5JPH6 523 aaKnown RBP16.29■□□□□ 0.2
SSBP1-201ENST00000265304 PPP4R3AQ6IN85 833 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 VTA1Q9NP79 307 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.29■□□□□ 0.2
SSBP1-201ENST00000265304 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 H3BQV1 296 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 ZNF865P0CJ78 1059 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-201ENST00000265304 TGFB3P10600 412 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
SSBP1-201ENST00000265304 CCND2P30279 289 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 TAPT1Q6NXT6 567 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 TBCKQ8TEA7 893 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
SSBP1-201ENST00000265304 IGLV3-22A0A075B6J6 115 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 CYBAP13498 195 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 NKX3-2P78367 333 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-201ENST00000265304 CEP55Q53EZ4 464 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 BRAPQ7Z569 592 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 GPRASP2Q96D09 838 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 ZSCAN16Q9H4T2 348 aaPredicted RBP16.27■□□□□ 0.2
SSBP1-201ENST00000265304 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
SSBP1-201ENST00000265304 SPATA31C2B4DYI2 1134 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 ECM2O94769 699 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 BRD1O95696 1058 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 ELNP15502 786 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 ITGB5P18084 799 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 CYP2C19P33261 490 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 CACNB2Q08289 660 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 PDE4DQ08499 809 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 RESTQ13127 1097 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 Q4G0T1 1027 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 IQSEC1Q6DN90 963 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 KCNV1Q6PIU1 500 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 NEK8Q86SG6 692 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 TRPV1Q8NER1 839 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 LENG9Q96B70 501 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 IPO9Q96P70 1041 aaKnown RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 MXRA8Q9BRK3 442 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
SSBP1-201ENST00000265304 ZDHHC9Q9Y397 364 aa16.26■□□□□ 0.19
SSBP1-201ENST00000265304 FRMPD3Q5JV73 1810 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 FAM205CA6NFA0 338 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 FAM86B1E9PN63 330 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 FAM86B2P0C5J1 330 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 ZSCAN22P10073 491 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-201ENST00000265304 INF2Q27J81 1249 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 PIK3AP1Q6ZUJ8 805 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 SENP7Q9BQF6 1050 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 CNPY2Q9Y2B0 182 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
SSBP1-201ENST00000265304 DOCK5Q9H7D0 1870 aa16.25■□□□□ 0.19
SSBP1-201ENST00000265304 SEMA3FQ13275 785 aa16.24■□□□□ 0.19
SSBP1-201ENST00000265304 RILPL1Q5EBL4 403 aa16.24■□□□□ 0.19
SSBP1-201ENST00000265304 SCFD2Q8WU76 684 aa16.24■□□□□ 0.19
SSBP1-201ENST00000265304 ZNF333Q96JL9 665 aa16.24■□□□□ 0.19
SSBP1-201ENST00000265304 CDHR1Q96JP9 859 aa16.24■□□□□ 0.19
SSBP1-201ENST00000265304 Q9Y3F1 56 aa16.24■□□□□ 0.19
SSBP1-201ENST00000265304 DDX49Q9Y6V7 483 aaKnown RBP16.24■□□□□ 0.19
SSBP1-201ENST00000265304 SEPT4O43236 478 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 FIBPO43427 364 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 INHAP05111 366 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 MYCLP12524 364 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-201ENST00000265304 CAPN2P17655 700 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 FOSBP53539 338 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 UBXN2AP68543 259 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 TRIM32Q13049 653 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 PKP1Q13835 747 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 GNPTABQ3T906 1256 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 NLRX1Q86UT6 975 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 CYP2W1Q8TAV3 490 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 EMID1Q96A84 441 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-201ENST00000265304 KCNMB3Q9NPA1 279 aa16.23■□□□□ 0.19
SSBP1-201ENST00000265304 PAK6Q9NQU5 681 aaPredicted RBP16.23■□□□□ 0.19
SSBP1-201ENST00000265304 DDX41Q9UJV9 622 aaKnown RBP16.23■□□□□ 0.19
SSBP1-201ENST00000265304 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms