RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 TBC1D5Q92609 795 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 SH2D4AQ9H788 454 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 PANK4Q9NVE7 773 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 NPR1P16066 1061 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 ACTN2P35609 894 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 MNAT1P51948 309 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 ZBED6P86452 979 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 FAM26FQ5R3K3 315 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 TMC4Q7Z404 712 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 UBLCP1Q8WVY7 318 aaPredicted RBP21.87■■□□□ 1.09
CSPG5-201ENST00000264723 DHTKD1Q96HY7 919 aaPredicted RBP21.87■■□□□ 1.09
CSPG5-201ENST00000264723 NDST4Q9H3R1 872 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 TACC3Q9Y6A5 838 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 ARL6IP4Q66PJ3 421 aaKnown RBP21.87■■□□□ 1.09
CSPG5-201ENST00000264723 CCDC17Q96LX7 622 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 KCNK3O14649 394 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 AKR1B1P15121 316 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 AMNQ9BXJ7 453 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 GLT8D2Q9H1C3 349 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 ESYT3A0FGR9 886 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 ATP8B1O43520 1251 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 GH2P01242 217 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 ABCB4P21439 1286 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 RDXP35241 583 aaKnown RBP21.86■■□□□ 1.09
CSPG5-201ENST00000264723 ASIC2Q16515 512 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 TBC1D16Q8TBP0 767 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 CNTNAP5Q8WYK1 1306 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 TDP2O95551 362 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 CCT5P48643 541 aa21.86■■□□□ 1.09
CSPG5-201ENST00000264723 RIOK1Q9BRS2 568 aaKnown RBP21.86■■□□□ 1.09
CSPG5-201ENST00000264723 EPB41P11171 864 aaKnown RBP21.85■■□□□ 1.09
CSPG5-201ENST00000264723 CHRNA5P30532 468 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 KIF11P52732 1056 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 GNGT1P63211 74 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 MDM2Q00987 491 aaPredicted RBP21.85■■□□□ 1.09
CSPG5-201ENST00000264723 SEPT2Q15019 361 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 NAP1L4Q99733 375 aaKnown RBP21.85■■□□□ 1.09
CSPG5-201ENST00000264723 ADAMTS1Q9UHI8 967 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 DCCP43146 1447 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 JCADQ9P266 1359 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 SUPT20HQ8NEM7 779 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 BCAS4Q8TDM0 211 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 IPO4Q8TEX9 1081 aaKnown RBP21.85■■□□□ 1.09
CSPG5-201ENST00000264723 PPP1R2P41236 205 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 CRKP46108 304 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 NFRKBQ6P4R8 1299 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 PI4KBQ9UBF8 816 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 PCDHA6Q9UN73 950 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 PCDHA8Q9Y5H6 950 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 FAM205AQ6ZU69 1335 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 RXRBP28702 533 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 PMS1P54277 932 aaKnown RBP21.85■■□□□ 1.09
CSPG5-201ENST00000264723 ADAM9Q13443 819 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 CFAP221Q4G0U5 840 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 NT5C3AQ9H0P0 336 aa21.85■■□□□ 1.09
CSPG5-201ENST00000264723 PACSIN2Q9UNF0 486 aaPredicted RBP21.85■■□□□ 1.09
CSPG5-201ENST00000264723 XRN1Q8IZH2 1706 aaKnown RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L10C9JJH3 530 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 PLEKP08567 350 aaPredicted RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 CYP2C19P33261 490 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 FAM71BQ8TC56 605 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 KRT12Q99456 494 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 FAM208AQ9UK61 1670 aaKnown RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 GJC1P36383 396 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 CYP2J2P51589 502 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 AOC3Q16853 763 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 CHURC1Q8WUH1 139 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 HSD3B7Q9H2F3 369 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 PICK1Q9NRD5 415 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 FRMD4BQ9Y2L6 1034 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 HYOU1Q9Y4L1 999 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 PCDHA13Q9Y5I0 950 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 NFAT5O94916 1531 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 LIG3P49916 1009 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 GFPT1Q06210 699 aaPredicted RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 TTBK2Q6IQ55 1244 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 FAM133AQ8N9E0 248 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 GOLGA5Q8TBA6 731 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 SCAF8Q9UPN6 1271 aaKnown RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 ATF5Q9Y2D1 282 aaPredicted RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 RRP15Q9Y3B9 282 aaKnown RBP21.84■■□□□ 1.09
CSPG5-201ENST00000264723 BCL9O00512 1426 aa21.84■■□□□ 1.09
CSPG5-201ENST00000264723 EXOC3O60645 756 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 ARHGAP44Q17R89 818 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 CCDC93Q567U6 631 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 ADSSL1Q8N142 457 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 CCDC155Q8N6L0 562 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 DDX12PQ92771 950 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 SELENOOQ9BVL4 669 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 FUT8Q9BYC5 575 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 THAP9Q9H5L6 903 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.83■■□□□ 1.09
CSPG5-201ENST00000264723 TESPA1A2RU30 521 aaPredicted RBP21.83■■□□□ 1.09
CSPG5-201ENST00000264723 TRIM66O15016 1216 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 ORC4O43929 436 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 GPATCH11Q8N954 259 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 DYDC1Q8WWB3 177 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 MASTLQ96GX5 879 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms