RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 GGT7Q9UJ14 662 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 MYO1FO00160 1098 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 MAP2K7O14733 419 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 SEMA3EO15041 775 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 UBE2SQ16763 222 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 MSL1Q68DK7 614 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 CCDC91Q7Z6B0 441 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 CAPN6Q9Y6Q1 641 aa15.46■□□□□ 0.07
TUBGCP3-201ENST00000261965 RIMBP2O15034 1052 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 CTNNA1P35221 906 aaKnown RBP15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLC16A2P36021 539 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLCO1A2P46721 670 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 HERC4Q5GLZ8 1057 aaPredicted RBP15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 DAAM2Q86T65 1068 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 TEX11Q8IYF3 940 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 ATP8A2Q9NTI2 1148 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 BCS1LQ9Y276 419 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 CLTAP09496 248 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 USP14P54578 494 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 SNX29Q8TEQ0 813 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 PHRF1Q9P1Y6 1649 aaKnown RBP15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 TRAPPC10P48553 1259 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 KLHL30Q0D2K2 578 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 NFIXQ14938 502 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 SV2BQ7L1I2 683 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 PYM1Q9BRP8 204 aaKnown RBP15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 STK38LQ9Y2H1 464 aa15.45■□□□□ 0.06
TUBGCP3-201ENST00000261965 TDP2O95551 362 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 MSANTD4Q8NCY6 345 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 LBHD1Q9BQE6 289 aaPredicted RBP15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 C6orf50Q9HD87 102 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 KCNK9Q9NPC2 374 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 MYH8P13535 1937 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 BAZ2AQ9UIF9 1905 aaKnown RBP15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 C6orf229H3BNL8 230 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 BAG3O95817 575 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 VPS41P49754 854 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 DUSP9Q99956 384 aaKnown RBP15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 PKD2L1Q9P0L9 805 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 ANKRD62A6NC57 917 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 CCNE1P24864 410 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 CFAP221Q4G0U5 840 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 KRT79Q5XKE5 535 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 TTI2Q6NXR4 508 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 IFT20Q8IY31 132 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 CAPN11Q9UMQ6 739 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 ITIH6Q6UXX5 1313 aa15.44■□□□□ 0.06
TUBGCP3-201ENST00000261965 BICDL2A1A5D9 508 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 USP17L5A8MUK1 530 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 EEF1GP26641 437 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 SLC35G1Q2M3R5 365 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 TCP11Q8WWU5 503 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 TBC1D5Q92609 795 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 LSM14BQ9BX40 385 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 CD2APQ9Y5K6 639 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 C4AP0C0L4 1744 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 PPP1R7Q15435 360 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 NEK8Q86SG6 692 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 RPGRQ92834 1020 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 THOC1Q96FV9 657 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 MLXIPLQ9NP71 852 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 MAD2L2Q9UI95 211 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 COL1A1P02452 1464 aaPredicted RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 LRRC53A6NM62 1247 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 CLNS1AP54105 237 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 CALCRLQ16602 461 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 REXO1Q8N1G1 1221 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 TRIM58Q8NG06 486 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 ARL8AQ96BM9 186 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 TCEAL9Q9UHQ7 104 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 A0A087WUV0 522 aaPredicted RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 BTDP43251 543 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 GNAQP50148 359 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 KIF11P52732 1056 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 RCAN1P53805 252 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 TPTE2Q6XPS3 522 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 DNAJC17Q9NVM6 304 aaKnown RBP15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 RAB21Q9UL25 225 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 PCDHB13Q9Y5F0 798 aa15.43■□□□□ 0.06
TUBGCP3-201ENST00000261965 KLRC4O43908 158 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 TUBBP07437 444 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 ZBED6P86452 979 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 C12orf60Q5U649 245 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 DDX42Q86XP3 938 aaKnown RBP eCLIP15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 C4orf32Q8N8J7 132 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 FAM133AQ8N9E0 248 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 NUDT12Q9BQG2 462 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 ALS2Q96Q42 1657 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 LRRC10BA6NIK2 292 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 CHMP2AO43633 222 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 ORC4O43929 436 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 AMPD2Q01433 879 aa15.42■□□□□ 0.06
TUBGCP3-201ENST00000261965 FBXO33Q7Z6M2 555 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms