RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 HOXA13P31271 388 aaPredicted RBP19.6■□□□□ 0.73
CGREF1-201ENST00000260595 TMEM67Q5HYA8 995 aa19.6■□□□□ 0.73
CGREF1-201ENST00000260595 CTAGE1Q96RT6 745 aa19.6■□□□□ 0.73
CGREF1-201ENST00000260595 MTIF3Q9H2K0 278 aaKnown RBP19.6■□□□□ 0.73
CGREF1-201ENST00000260595 A0A0C4DFX4 3053 aa19.6■□□□□ 0.73
CGREF1-201ENST00000260595 PNMA6FA0A0J9YX94 578 aa19.59■□□□□ 0.73
CGREF1-201ENST00000260595 SART3Q15020 963 aaKnown RBP19.59■□□□□ 0.73
CGREF1-201ENST00000260595 VSIG10LQ86VR7 867 aa19.59■□□□□ 0.73
CGREF1-201ENST00000260595 SESTD1Q86VW0 696 aa19.59■□□□□ 0.73
CGREF1-201ENST00000260595 IL31RAQ8NI17 732 aa19.59■□□□□ 0.73
CGREF1-201ENST00000260595 LSG1Q9H089 658 aaKnown RBP19.59■□□□□ 0.73
CGREF1-201ENST00000260595 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
CGREF1-201ENST00000260595 PITPNM1O00562 1244 aa19.58■□□□□ 0.72
CGREF1-201ENST00000260595 PFKMP08237 780 aa19.58■□□□□ 0.72
CGREF1-201ENST00000260595 IQCF3P0C7M6 154 aa19.58■□□□□ 0.72
CGREF1-201ENST00000260595 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.72
CGREF1-201ENST00000260595 COL9A3Q14050 684 aaPredicted RBP19.58■□□□□ 0.72
CGREF1-201ENST00000260595 PGM5Q15124 567 aa19.58■□□□□ 0.72
CGREF1-201ENST00000260595 CATIPQ7Z7H3 387 aa19.58■□□□□ 0.72
CGREF1-201ENST00000260595 LY9Q9HBG7 655 aa19.58■□□□□ 0.72
CGREF1-201ENST00000260595 YBX2Q9Y2T7 364 aaKnown RBP19.58■□□□□ 0.72
CGREF1-201ENST00000260595 GCOM1H8Y6P7 765 aaPredicted RBP19.57■□□□□ 0.72
CGREF1-201ENST00000260595 POLR2MP0CAP2 368 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
CGREF1-201ENST00000260595 TRAF1Q13077 416 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 LAMC2Q13753 1193 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 RAB30Q15771 203 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 DGKDQ16760 1214 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 GDF6Q6KF10 455 aaPredicted RBP19.57■□□□□ 0.72
CGREF1-201ENST00000260595 DEFB128Q7Z7B8 93 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 PPTC7Q8NI37 304 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 MAP3K14Q99558 947 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 MTA3Q9BTC8 594 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 MSRAQ9UJ68 235 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 SLC4A7Q9Y6M7 1214 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 MYH6P13533 1939 aa19.57■□□□□ 0.72
CGREF1-201ENST00000260595 EYSQ5T1H1 3165 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 HOXD8P13378 290 aaPredicted RBP19.56■□□□□ 0.72
CGREF1-201ENST00000260595 RFC2P35250 354 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 CHMP4BP1P59074 171 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 PTGISQ16647 500 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 MYSM1Q5VVJ2 828 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 DHX37Q8IY37 1157 aaKnown RBP19.56■□□□□ 0.72
CGREF1-201ENST00000260595 ZNF654Q8IZM8 581 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 MYL10Q9BUA6 226 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 NKX2-4Q9H2Z4 354 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 UNC80Q8N2C7 3258 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 KIAA1217Q5T5P2 1943 aa19.56■□□□□ 0.72
CGREF1-201ENST00000260595 HAS3O00219 553 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 RABGGTBP53611 331 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 SP2Q02086 613 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 BFSP2Q13515 415 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 CELF3Q5SZQ8 465 aaKnown RBP19.55■□□□□ 0.72
CGREF1-201ENST00000260595 KCNV1Q6PIU1 500 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 FCHSD1Q86WN1 690 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 RETREG2Q8NC44 543 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 DHX38Q92620 1227 aaKnown RBP19.55■□□□□ 0.72
CGREF1-201ENST00000260595 GPKOWQ92917 476 aaPredicted RBP eCLIP19.55■□□□□ 0.72
CGREF1-201ENST00000260595 ZFP91Q96JP5 570 aaPredicted RBP19.55■□□□□ 0.72
CGREF1-201ENST00000260595 SPZ1Q9BXG8 430 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 COL25A1Q9BXS0 654 aaPredicted RBP19.55■□□□□ 0.72
CGREF1-201ENST00000260595 PRDM12Q9H4Q4 367 aa19.55■□□□□ 0.72
CGREF1-201ENST00000260595 FRMPD4Q14CM0 1322 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 ZBBXA8MT70 800 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 SLC27A2O14975 620 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 PRC1O43663 620 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 DDAH1O94760 285 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 F2P00734 622 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 TGFB3P10600 412 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 SMARCA1P28370 1054 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 PSEN2P49810 448 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 GPNMBQ14956 572 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 NECTIN1Q15223 517 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 HSDL1Q3SXM5 330 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 USP38Q8NB14 1042 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 PIBF1Q8WXW3 757 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 HDAC6Q9UBN7 1215 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 GTF2IRD1Q9UHL9 959 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 NOD1Q9Y239 953 aa19.54■□□□□ 0.72
CGREF1-201ENST00000260595 SH2B2O14492 632 aaPredicted RBP19.53■□□□□ 0.72
CGREF1-201ENST00000260595 PPFIA4O75335 1185 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 GGPS1O95749 300 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 ZNF286BP0CG31 522 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 MYOGP15173 224 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 ATP2A2P16615 1042 aaKnown RBP19.53■□□□□ 0.72
CGREF1-201ENST00000260595 UBA1P22314 1058 aaKnown RBP19.53■□□□□ 0.72
CGREF1-201ENST00000260595 CCND2P30279 289 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 MRPS9P82933 396 aaKnown RBP19.53■□□□□ 0.72
CGREF1-201ENST00000260595 RBL2Q08999 1139 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 MFSD10Q14728 455 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 CASC1Q6TDU7 716 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 SKAP1Q86WV1 359 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 CAGE1Q8TC20 777 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 SLC28A3Q9HAS3 691 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 PCDHA11Q9Y5I1 949 aa19.53■□□□□ 0.72
CGREF1-201ENST00000260595 SORBS3O60504 671 aa19.52■□□□□ 0.72
CGREF1-201ENST00000260595 MCM5P33992 734 aa19.52■□□□□ 0.72
CGREF1-201ENST00000260595 ADGRE1Q14246 886 aa19.52■□□□□ 0.72
CGREF1-201ENST00000260595 KIAA0753Q2KHM9 967 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms