RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 SRLQ86TD4 932 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 HSD3B7Q9H2F3 369 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 CAPN7Q9Y6W3 813 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 MED1Q15648 1581 aaPredicted RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 TARSL2A2RTX5 802 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 KRIT1O00522 736 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 CAMTA2O94983 1202 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 NTSR2O95665 410 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 KLK7P49862 253 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 GPR101Q96P66 508 aaPredicted RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 TNFAIP3P21580 790 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 APBA1Q02410 837 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 UBE2SQ16763 222 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 USH1GQ495M9 461 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 DDX12PQ92771 950 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 RBM17Q96I25 401 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 TMEM260Q9NX78 707 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 NFU1Q9UMS0 254 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 NR2F2P24468 414 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 GFPT1Q06210 699 aaPredicted RBP11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 CCDC25Q86WR0 208 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 CABS1Q96KC9 395 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 SNX12Q9UMY4 172 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 FRMD4BQ9Y2L6 1034 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 A0A087WUV0 522 aaPredicted RBP11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 SERPING1P05155 500 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 H2AFZP0C0S5 128 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 MAGEA9P43362 315 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 NNTQ13423 1086 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 ASPRV1Q53RT3 343 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 PRR16Q569H4 304 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 H2AFVQ71UI9 128 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 SPATA4Q8NEY3 305 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 VIPAS39Q9H9C1 493 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 SMIM22K7EJ46 135 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 NEFHP12036 1026 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 ABCB4P21439 1286 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 PDCLQ13371 301 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 ALS2CLQ60I27 953 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 DPH5Q9H2P9 285 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 MTRF1LQ9UGC7 380 aaKnown RBP11.08□□□□□ -0.64
SEMA6A-201ENST00000257414 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 SLC16A2P36021 539 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 SYCE1Q8N0S2 351 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 NAP1L3Q99457 506 aaPredicted RBP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 LRRC1Q9BTT6 524 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 STAT1P42224 750 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 PSMD2Q13200 908 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 MTMR3Q13615 1198 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 SEPT7Q16181 437 aaKnown RBP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 EXOC3L4Q17RC7 722 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 TRAPPC11Q7Z392 1133 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 MYCT1Q8N699 235 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 ANKS4BQ8N8V4 417 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 HPCAL4Q9UM19 191 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 RGPD2P0DJD1 1756 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 PVALEFA0A1B0GWK0 134 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 ESYT3A0FGR9 886 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 PALMO75781 387 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 NT5C2P49902 561 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 PABPC4Q13310 644 aaKnown RBP eCLIP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 MSL1Q68DK7 614 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 CCNI2Q6ZMN8 369 aaPredicted RBP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 USP40Q9NVE5 1235 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 FEZ2Q9UHY8 353 aaPredicted RBP11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 AMFRQ9UKV5 643 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 MRC1P22897 1456 aa11.07□□□□□ -0.64
SEMA6A-201ENST00000257414 CETN2P41208 172 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 CYP4A11Q02928 519 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 TCP10Q12799 353 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 SF3A3Q12874 501 aaKnown RBP eCLIP11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 SBK1Q52WX2 424 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 NAA35Q5VZE5 725 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 TBC1D9BQ66K14 1250 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 GUF1Q8N442 669 aaKnown RBP11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 NSRP1Q9H0G5 558 aaKnown RBP11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 RAB21Q9UL25 225 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 ARHGAP44Q17R89 818 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 ADAT2Q7Z6V5 191 aaKnown RBP11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 GJA10Q969M2 543 aa11.06□□□□□ -0.64
SEMA6A-201ENST00000257414 ZNF622Q969S3 477 aaKnown RBP eCLIP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms