RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 HOMER1Q86YM7 354 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.97□□□□□ -0.01
SLIRP-201ENST00000238688 GPCPD1Q9NPB8 672 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 KCNH3Q9ULD8 1083 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 WDR46O15213 610 aaKnown RBP14.96□□□□□ -0.01
SLIRP-201ENST00000238688 XRCC6P12956 609 aaKnown RBP eCLIP14.96□□□□□ -0.01
SLIRP-201ENST00000238688 TXLNAP40222 546 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-201ENST00000238688 NDUFA8P51970 172 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 CCL14Q16627 93 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 PLEKHH3Q7Z736 793 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 NEK8Q86SG6 692 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 UBA5Q9GZZ9 404 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 NAT10Q9H0A0 1025 aaKnown RBP14.96□□□□□ -0.01
SLIRP-201ENST00000238688 GOLPH3LQ9H4A5 285 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 ANO10Q9NW15 660 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 MTMR7Q9Y216 660 aa14.96□□□□□ -0.01
SLIRP-201ENST00000238688 RPTORQ8N122 1335 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 ZNF236Q9UL36 1845 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 H0YGN5 161 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 FARP2O94887 1054 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-201ENST00000238688 MARCKSP29966 332 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-201ENST00000238688 CLK2P49760 499 aaKnown RBP14.95□□□□□ -0.02
SLIRP-201ENST00000238688 TYRO3Q06418 890 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 CDC37Q16543 378 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-201ENST00000238688 STX1AQ16623 288 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 PPP4R3AQ6IN85 833 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 SHC4Q6S5L8 630 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 KCTD1Q719H9 257 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 FAM200AQ8TCP9 573 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 SOCS4Q8WXH5 440 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 MAGEF1Q9HAY2 307 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 MYH7BA7E2Y1 1941 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 SMCHD1A6NHR9 2005 aa14.95□□□□□ -0.02
SLIRP-201ENST00000238688 A0A1B0GVL5 298 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 PIK3CDO00329 1044 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 IGHA2P01877 340 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 MYL1P05976 194 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 USP11P51784 963 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 PTGDRQ13258 359 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 COG2Q14746 738 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 QRICH1Q2TAL8 776 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 CT47A1Q5JQC4 288 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-201ENST00000238688 HABP4Q5JVS0 413 aaKnown RBP14.94□□□□□ -0.02
SLIRP-201ENST00000238688 FBXO11Q86XK2 927 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 DIS3LQ8TF46 1054 aaKnown RBP14.94□□□□□ -0.02
SLIRP-201ENST00000238688 GTPBP4Q9BZE4 634 aaKnown RBP14.94□□□□□ -0.02
SLIRP-201ENST00000238688 RAB34Q9BZG1 259 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 CUEDC2Q9H467 287 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 PSTPIP2Q9H939 334 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 VAT1LQ9HCJ6 419 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 FLRT1Q9NZU1 646 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 KIAA1468Q9P260 1216 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 PCDHA1Q9Y5I3 950 aa14.94□□□□□ -0.02
SLIRP-201ENST00000238688 TMEM232C9JQI7 657 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 DSG3P32926 999 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 MAP2K5Q13163 448 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 SPICE1Q8N0Z3 855 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 TRIML1Q8N9V2 468 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 PIBF1Q8WXW3 757 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 BPIFA3Q9BQP9 254 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 MOV10L1Q9BXT6 1211 aaKnown RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 EHMT1Q9H9B1 1298 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 HMX1Q9NP08 348 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 MAP3K20Q9NYL2 800 aaKnown RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 COLQQ9Y215 455 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-201ENST00000238688 STK24Q9Y6E0 443 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 PLXNA1Q9UIW2 1896 aa14.93□□□□□ -0.02
SLIRP-201ENST00000238688 NEMFO60524 1076 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 HOXC6P09630 235 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
SLIRP-201ENST00000238688 CAPN2P17655 700 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 RGS2P41220 211 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 IKQ13123 557 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-201ENST00000238688 GRB14Q14449 540 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 EARS2Q5JPH6 523 aaKnown RBP14.92□□□□□ -0.02
SLIRP-201ENST00000238688 TTBK2Q6IQ55 1244 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 DTHD1Q6ZMT9 781 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 KRBA2Q6ZNG9 492 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 CEP57L1Q8IYX8 460 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 NPLOC4Q8TAT6 608 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
SLIRP-201ENST00000238688 APBA2Q99767 749 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 RBSNQ9H1K0 784 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 HOXC10Q9NYD6 342 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 TUBE1Q9UJT0 475 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 OGDHLQ9ULD0 1010 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 ADAMTS5Q9UNA0 930 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 ABCB11O95342 1321 aa14.92□□□□□ -0.02
SLIRP-201ENST00000238688 SLC15A5A6NIM6 579 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 OR52Z1P0C646 297 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 SLFN14P0C7P3 912 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms