RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 EYSQ5T1H1 3165 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 MEIS2O14770 477 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 MMP1P03956 469 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 ZNF865P0CJ78 1059 aaPredicted RBP18.78■□□□□ 0.6
LIM2-201ENST00000221973 PDCP20941 246 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 HSD17B4P51659 736 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.6
LIM2-201ENST00000221973 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 DEFB123Q8N688 67 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 IPO9Q96P70 1041 aaKnown RBP18.78■□□□□ 0.6
LIM2-201ENST00000221973 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
LIM2-201ENST00000221973 DNAJC25-GNG10A0A024R161 153 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 VPS37CA5D8V6 355 aaPredicted RBP18.77■□□□□ 0.6
LIM2-201ENST00000221973 KBTBD13C9JR72 458 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 SYT1P21579 422 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 NPY5RQ15761 445 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 GALNT17Q6IS24 598 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 BLIDQ8IZY5 108 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 RASGRP4Q8TDF6 673 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 OXER1Q8TDS5 423 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 SYTL5Q8TDW5 730 aaPredicted RBP18.77■□□□□ 0.6
LIM2-201ENST00000221973 PURBQ96QR8 312 aaKnown RBP18.77■□□□□ 0.6
LIM2-201ENST00000221973 TMEM260Q9NX78 707 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 ATP11BQ9Y2G3 1177 aa18.77■□□□□ 0.6
LIM2-201ENST00000221973 POTEB2H3BUK9 544 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 PIK3CDO00329 1044 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 KRT2P35908 639 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 GHRHRQ02643 423 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.59
LIM2-201ENST00000221973 TRIM60Q495X7 471 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 JAKMIP3Q5VZ66 844 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 DIS3L2Q8IYB7 885 aaKnown RBP18.76■□□□□ 0.59
LIM2-201ENST00000221973 REXO1Q8N1G1 1221 aaKnown RBP18.76■□□□□ 0.59
LIM2-201ENST00000221973 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 DAGLBQ8NCG7 672 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 BRMS1Q9HCU9 246 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 MTMR10Q9NXD2 777 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
LIM2-201ENST00000221973 COL20A1Q9P218 1284 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 PHF24Q9UPV7 400 aa18.76■□□□□ 0.59
LIM2-201ENST00000221973 SNAI1O95863 264 aaPredicted RBP18.75■□□□□ 0.59
LIM2-201ENST00000221973 PGK1P00558 417 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 CLK2P49760 499 aaKnown RBP18.75■□□□□ 0.59
LIM2-201ENST00000221973 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 C1orf53Q5VUE5 145 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 MCTP1Q6DN14 999 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 SH3RF1Q7Z6J0 888 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 LENG1Q96BZ8 264 aaPredicted RBP18.75■□□□□ 0.59
LIM2-201ENST00000221973 PGBD1Q96JS3 809 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 FGD4Q96M96 766 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 TAAR1Q96RJ0 339 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 MAF1Q9H063 256 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 XPNPEP3Q9NQH7 507 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 PCDHA6Q9UN73 950 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 PCDHA8Q9Y5H6 950 aa18.75■□□□□ 0.59
LIM2-201ENST00000221973 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 SPDYE3A6NKU9 549 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 BTBD18B2RXH4 712 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 STX6O43752 255 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
LIM2-201ENST00000221973 RARBP10826 455 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 NR5A1Q13285 461 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 GNL2Q13823 731 aaKnown RBP18.74■□□□□ 0.59
LIM2-201ENST00000221973 MAMDC4Q6UXC1 1216 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
LIM2-201ENST00000221973 PDLIM7Q9NR12 457 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 MYH6P13533 1939 aa18.74■□□□□ 0.59
LIM2-201ENST00000221973 M0R2N6 131 aa18.73■□□□□ 0.59
LIM2-201ENST00000221973 ADAMTS4O75173 837 aa18.73■□□□□ 0.59
LIM2-201ENST00000221973 MSL3Q8N5Y2 521 aaKnown RBP18.73■□□□□ 0.59
LIM2-201ENST00000221973 FAM133AQ8N9E0 248 aa18.73■□□□□ 0.59
LIM2-201ENST00000221973 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
LIM2-201ENST00000221973 MTMR6Q9Y217 621 aa18.73■□□□□ 0.59
LIM2-201ENST00000221973 SYNGAP1Q96PV0 1343 aa18.73■□□□□ 0.59
LIM2-201ENST00000221973 SOWAHBA6NEL2 793 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
LIM2-201ENST00000221973 AKR1A1P14550 325 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 ITGB8P26012 769 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 AP3B2Q13367 1082 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 FOXD4L5Q5VV16 416 aaPredicted RBP18.72■□□□□ 0.59
LIM2-201ENST00000221973 TEX2Q8IWB9 1127 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 FOXD4L4Q8WXT5 416 aaPredicted RBP18.72■□□□□ 0.59
LIM2-201ENST00000221973 RMDN3Q96TC7 470 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 ANO3Q9BYT9 981 aa18.72■□□□□ 0.59
LIM2-201ENST00000221973 CCDC194A0A1B0GVG4 234 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 KIF28PB7ZC32 967 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 ADCY6O43306 1168 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
LIM2-201ENST00000221973 TLE2Q04725 743 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 PKP1Q13835 747 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 EARS2Q5JPH6 523 aaKnown RBP18.71■□□□□ 0.59
LIM2-201ENST00000221973 C9orf50Q5SZB4 431 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 ARHGEF16Q5VV41 709 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 MCTP2Q6DN12 878 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 PIK3AP1Q6ZUJ8 805 aa18.71■□□□□ 0.59
LIM2-201ENST00000221973 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms