RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 LMCD1Q9NZU5 365 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 CHMP2AO43633 222 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 ZNF189O75820 626 aaPredicted RBP11.64□□□□□ -0.55
VPS18-201ENST00000220509 STK10O94804 968 aaKnown RBP11.64□□□□□ -0.55
VPS18-201ENST00000220509 PAFAH1B1P43034 410 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 RASA3Q14644 834 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 ADGRA1Q86SQ6 560 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 NOA1Q8NC60 698 aaKnown RBP11.64□□□□□ -0.55
VPS18-201ENST00000220509 TRIM4Q9C037 500 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 NACA2Q9H009 215 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 MAN1B1Q9UKM7 699 aa11.64□□□□□ -0.55
VPS18-201ENST00000220509 SH3BP5O60239 455 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 PLS1Q14651 629 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 DRAXINQ8NBI3 349 aaPredicted RBP11.63□□□□□ -0.55
VPS18-201ENST00000220509 MKL1Q969V6 931 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 CCDC114Q96M63 670 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 CENPOQ9BU64 300 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 HDAC6Q9UBN7 1215 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
VPS18-201ENST00000220509 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 PPME1Q9Y570 386 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
VPS18-201ENST00000220509 CHRNA5P30532 468 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 CACNB3P54284 484 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 NCAPHQ15003 741 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 SND1Q7KZF4 910 aaKnown RBP eCLIP11.63□□□□□ -0.55
VPS18-201ENST00000220509 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 PHACTR1Q9C0D0 580 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 SUN2Q9UH99 717 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 KCPQ6ZWJ8 1503 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
VPS18-201ENST00000220509 FGFR2P21802 821 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 SLC16A2P36021 539 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 GNGT1P63211 74 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 IQCEQ6IPM2 695 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 NELFCDQ8IXH7 590 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 KIRREL3Q8IZU9 778 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 TTC30BQ8N4P2 665 aa11.63□□□□□ -0.55
VPS18-201ENST00000220509 FANCGO15287 622 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 ALDH1B1P30837 517 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 SESN3P58005 492 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 LAMB3Q13751 1172 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 CCDC122Q5T0U0 273 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 SHC4Q6S5L8 630 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 B4GALNT2Q8NHY0 566 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 COA7Q96BR5 231 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 SAAL1Q96ER3 474 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 HPS5Q9UPZ3 1129 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 PECAM1P16284 738 aaPredicted RBP11.62□□□□□ -0.55
VPS18-201ENST00000220509 HNRNPH1P31943 449 aaKnown RBP11.62□□□□□ -0.55
VPS18-201ENST00000220509 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
VPS18-201ENST00000220509 KIF5AQ12840 1032 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
VPS18-201ENST00000220509 TMTC3Q6ZXV5 915 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 FAM71BQ8TC56 605 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 SCLT1Q96NL6 688 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 EHD4Q9H223 541 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 SRPRBQ9Y5M8 271 aaKnown RBP11.62□□□□□ -0.55
VPS18-201ENST00000220509 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
VPS18-201ENST00000220509 MROH7-TTC4A0A0A0MT08 1334 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 PPIP5K2O43314 1243 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 BBOX1O75936 387 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 PTPREP23469 700 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 GJA8P48165 433 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 VPS36Q86VN1 386 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 PIGSQ96S52 555 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 C5P01031 1676 aa11.62□□□□□ -0.55
VPS18-201ENST00000220509 IKBKBO14920 756 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 CFBP00751 764 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 ACBD5Q5T8D3 534 aaPredicted RBP11.61□□□□□ -0.55
VPS18-201ENST00000220509 LRRC31Q6UY01 552 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
VPS18-201ENST00000220509 TACO1Q9BSH4 297 aaKnown RBP11.61□□□□□ -0.55
VPS18-201ENST00000220509 EHMT1Q9H9B1 1298 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 CD209Q9NNX6 404 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
VPS18-201ENST00000220509 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 A0A087WUV0 522 aaPredicted RBP11.61□□□□□ -0.55
VPS18-201ENST00000220509 KRT86O43790 486 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 FMR1Q06787 632 aaKnown RBP eCLIP11.61□□□□□ -0.553e-7■■■■□ 21.9
VPS18-201ENST00000220509 MORC3Q14149 939 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 CRYMQ14894 314 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 TMCO4Q5TGY1 634 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 SPATA1Q5VX52 437 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 CNNM4Q6P4Q7 775 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 KCTD1Q719H9 257 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 COL23A1Q86Y22 540 aaPredicted RBP11.61□□□□□ -0.55
VPS18-201ENST00000220509 ALS2CR12Q96Q35 445 aa11.61□□□□□ -0.55
VPS18-201ENST00000220509 TRIM10Q9UDY6 481 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms