RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
SNU13-201ENST00000215956 PHF24Q9UPV7 400 aa13.94□□□□□ -0.18
SNU13-201ENST00000215956 SYCE3A1L190 88 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 DNAJB2P25686 324 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 SEPT2Q15019 361 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 ABRAQ8N0Z2 381 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 MKL1Q969V6 931 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 MAML3Q96JK9 1138 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 MROH8Q9H579 483 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 XPNPEP3Q9NQH7 507 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.93□□□□□ -0.18
SNU13-201ENST00000215956 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 CLIP2Q9UDT6 1046 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 KCNJ14Q9UNX9 436 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 KIAA0355O15063 1070 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
SNU13-201ENST00000215956 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 RARBP10826 455 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 PDHBP11177 359 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 RAG1P15918 1043 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 FPGSQ05932 587 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 MB21D1Q8N884 522 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 DAGLBQ8NCG7 672 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
SNU13-201ENST00000215956 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 CLIC4Q9Y696 253 aa13.93□□□□□ -0.18
SNU13-201ENST00000215956 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
SNU13-201ENST00000215956 CUTAO60888 179 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 GNA11P29992 359 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 FAM160A1Q05DH4 1040 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 PLS1Q14651 629 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 RNF180Q86T96 592 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 TNMDQ9H2S6 317 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 CLSTN2Q9H4D0 955 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 PCDHA7Q9UN72 937 aa13.92□□□□□ -0.18
SNU13-201ENST00000215956 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.91□□□□□ -0.18
SNU13-201ENST00000215956 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.91□□□□□ -0.18
SNU13-201ENST00000215956 A0A1W2PQ45 241 aaPredicted RBP13.91□□□□□ -0.18
SNU13-201ENST00000215956 A0A1W2PQY0 241 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 ICA1Q05084 483 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 PPP1R18Q6NYC8 613 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 C6orf50Q9HD87 102 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 NRBP1Q9UHY1 535 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 PCDHA4Q9UN74 947 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 BDP1A6H8Y1 2624 aa13.91□□□□□ -0.18
SNU13-201ENST00000215956 CHD7Q9P2D1 2997 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 PGK1P00558 417 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 FCER1AP12319 257 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 CMA1P23946 247 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 DSG3P32926 999 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 BLIDQ8IZY5 108 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
SNU13-201ENST00000215956 FSIP1Q8NA03 581 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 TIFAQ96CG3 184 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 CCDC34Q96HJ3 373 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 GLT8D2Q9H1C3 349 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 TMEM39AQ9NV64 488 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
SNU13-201ENST00000215956 ESYT2A0FGR8 921 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 FLOT1O75955 427 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 CAVIN2O95810 425 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 LIG1P18858 919 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 CCDC96Q2M329 555 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 KIAA1755Q5JYT7 1200 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 HEATR3Q7Z4Q2 680 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 LRRC47Q8N1G4 583 aaKnown RBP13.9□□□□□ -0.19
SNU13-201ENST00000215956 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 ATG4CQ96DT6 458 aa13.9□□□□□ -0.19
SNU13-201ENST00000215956 FTOQ9C0B1 505 aaKnown RBP eCLIP13.9□□□□□ -0.19
SNU13-201ENST00000215956 REV3LO60673 3130 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 GBF1Q92538 1859 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 NAPAP54920 295 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 TRAF1Q13077 416 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 PTPAQ15257 358 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
SNU13-201ENST00000215956 MMP19Q99542 508 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
SNU13-201ENST00000215956 XIRP2A4UGR9 3374 aa13.88□□□□□ -0.19
SNU13-201ENST00000215956 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
SNU13-201ENST00000215956 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
SNU13-201ENST00000215956 STXBP3O00186 592 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms