RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNRPD3-201ENST00000215829 CYP2W1Q8TAV3 490 aa18.04■□□□□ 0.48
SNRPD3-201ENST00000215829 AK8Q96MA6 479 aa18.04■□□□□ 0.48
SNRPD3-201ENST00000215829 IGLV3-22A0A075B6J6 115 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 MARCH6O60337 910 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 KINO60870 393 aaKnown RBP18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 TECP42680 631 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 FXR2P51116 673 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 PGM5Q15124 567 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 SLFN12Q8IYM2 578 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 SHCBP1Q8NEM2 672 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 PURBQ96QR8 312 aaKnown RBP18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 MROH8Q9H579 483 aa18.03■□□□□ 0.48
SNRPD3-201ENST00000215829 IGF2BP3O00425 579 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 MEIS1O00470 390 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 CCNA1P78396 465 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 PDIA5Q14554 519 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 TMEM266Q2M3C6 531 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 XRRA1Q6P2D8 792 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 ANKRD13CQ8N6S4 541 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 IGSF22Q8N9C0 903 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 IL31RAQ8NI17 732 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 ETNPPLQ8TBG4 499 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 FAM20AQ96MK3 541 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 TIGD1Q96MW7 591 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
SNRPD3-201ENST00000215829 MXRA8Q9BRK3 442 aa18.02■□□□□ 0.47
SNRPD3-201ENST00000215829 RAB34Q9BZG1 259 aa18.02■□□□□ 0.47
SNRPD3-201ENST00000215829 R3HDMLQ9H3Y0 253 aa18.02■□□□□ 0.47
SNRPD3-201ENST00000215829 PCDHA12Q9UN75 941 aa18.02■□□□□ 0.47
SNRPD3-201ENST00000215829 MSH4O15457 936 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 POLR2DO15514 142 aaKnown RBP18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 CAMK4Q16566 473 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 NIPA1Q7RTP0 329 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 PLA2G4DQ86XP0 818 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 DNERQ8NFT8 737 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 TNMDQ9H2S6 317 aa18.01■□□□□ 0.47
SNRPD3-201ENST00000215829 ITGB5P18084 799 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 CDC25AP30304 524 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 TXLNAP40222 546 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 SETQ01105 290 aaPredicted RBP18■□□□□ 0.47
SNRPD3-201ENST00000215829 SREBF2Q12772 1141 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 VSIG10LQ86VR7 867 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 GJA10Q969M2 543 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 ZFP91Q96JP5 570 aaPredicted RBP18■□□□□ 0.47
SNRPD3-201ENST00000215829 PANK2Q9BZ23 570 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 CCSER1Q9C0I3 900 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 UBIAD1Q9Y5Z9 338 aa18■□□□□ 0.47
SNRPD3-201ENST00000215829 SYCE3A1L190 88 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 CTAGE5O15320 804 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 NR3C2P08235 984 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 BCRP11274 1271 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 MYCLP12524 364 aaPredicted RBP17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 UBA7P41226 1012 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 ZNF445P59923 1031 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 CNTN2Q02246 1040 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 LONRF3Q496Y0 759 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 PDILTQ8N807 584 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 MMP19Q99542 508 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 SDF4Q9BRK5 362 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 PYM1Q9BRP8 204 aaKnown RBP17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 PORCNQ9H237 461 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 LCTP09848 1927 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 A0A087X0B3 334 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 POTEB2H3BUK9 544 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 CCND2P30279 289 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 TM4SF4P48230 202 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 KCTD2Q14681 263 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 EFCC1Q9HA90 598 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 JADE2Q9NQC1 790 aa17.99■□□□□ 0.47
SNRPD3-201ENST00000215829 ARP10275 920 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 FCER1AP12319 257 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 CYP4F22Q6NT55 531 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 KRBA2Q6ZNG9 492 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 RBM43Q6ZSC3 357 aaKnown RBP17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 FAM133AQ8N9E0 248 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 UIMC1Q96RL1 719 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
SNRPD3-201ENST00000215829 POTEMA6NI47 508 aa17.97■□□□□ 0.47
SNRPD3-201ENST00000215829 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
SNRPD3-201ENST00000215829 CABP7Q86V35 215 aa17.97■□□□□ 0.47
SNRPD3-201ENST00000215829 IQUBQ8NA54 791 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms