RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GRM4Q14833 912 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 ARHGEF16Q5VV41 709 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 SEPT14Q6ZU15 432 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 AFG1LQ8WV93 481 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 KAT2BQ92831 832 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 SLC4A7Q9Y6M7 1214 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
ERCC1-201ENST00000013807 CFBP00751 764 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
ERCC1-201ENST00000013807 CASTP20810 708 aaKnown RBP18.46■□□□□ 0.55
ERCC1-201ENST00000013807 RBL2Q08999 1139 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 SLC35G1Q2M3R5 365 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 KCNV1Q6PIU1 500 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 VSIG10LQ86VR7 867 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 PDCD2LQ9BRP1 358 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 PCDHA11Q9Y5I1 949 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 PCDHA1Q9Y5I3 950 aa18.46■□□□□ 0.55
ERCC1-201ENST00000013807 E7EWF7 191 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
ERCC1-201ENST00000013807 RGS20O76081 388 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 TGFB3P10600 412 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 EIF2AK2P19525 551 aaKnown RBP18.45■□□□□ 0.54
ERCC1-201ENST00000013807 BFSP2Q13515 415 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 LAMC2Q13753 1193 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 DGKDQ16760 1214 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 NCOA7Q8NI08 942 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 PPTC7Q8NI37 304 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 PHOSPHO2Q8TCD6 241 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 GAS2L1Q99501 681 aaPredicted RBP18.45■□□□□ 0.54
ERCC1-201ENST00000013807 MAP3K14Q99558 947 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 MTA3Q9BTC8 594 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 SLC28A3Q9HAS3 691 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 YBX2Q9Y2T7 364 aaKnown RBP18.45■□□□□ 0.54
ERCC1-201ENST00000013807 REV3LO60673 3130 aa18.45■□□□□ 0.54
ERCC1-201ENST00000013807 HAS3O00219 553 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 CYTH3O43739 400 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 ACTN1P12814 892 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 FAM47CQ5HY64 1035 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 RETREG2Q8NC44 543 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 IGDCC4Q8TDY8 1250 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 MUC3AQ02505 3323 aa18.44■□□□□ 0.54
ERCC1-201ENST00000013807 PRRC2BQ5JSZ5 2229 aaKnown RBP18.43■□□□□ 0.54
ERCC1-201ENST00000013807 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 IFIT3O14879 490 aaKnown RBP18.43■□□□□ 0.54
ERCC1-201ENST00000013807 PPFIA4O75335 1185 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 PARNO95453 639 aaKnown RBP18.43■□□□□ 0.54
ERCC1-201ENST00000013807 F2P00734 622 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 ATP2A2P16615 1042 aaKnown RBP18.43■□□□□ 0.54
ERCC1-201ENST00000013807 PGM5Q15124 567 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 PTGISQ16647 500 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 MYSM1Q5VVJ2 828 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 USP38Q8NB14 1042 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 PRDM12Q9H4Q4 367 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 GTF2IRD1Q9UHL9 959 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 MRVI1Q9Y6F6 885 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 TAF6LQ9Y6J9 622 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
ERCC1-201ENST00000013807 ERICH2A1L162 156 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 POU3F3P20264 500 aaPredicted RBP18.42■□□□□ 0.54
ERCC1-201ENST00000013807 SMARCA1P28370 1054 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 ADGRE1Q14246 886 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 GPNMBQ14956 572 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 WTAPQ15007 396 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
ERCC1-201ENST00000013807 GDF6Q6KF10 455 aaPredicted RBP18.42■□□□□ 0.54
ERCC1-201ENST00000013807 MB21D2Q8IYB1 491 aaPredicted RBP18.42■□□□□ 0.54
ERCC1-201ENST00000013807 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 SYMPKQ92797 1274 aaKnown RBP18.42■□□□□ 0.54
ERCC1-201ENST00000013807 SLC9A7Q96T83 725 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 KATNAL1Q9BW62 490 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
ERCC1-201ENST00000013807 DOCK5Q9H7D0 1870 aa18.41■□□□□ 0.54
ERCC1-201ENST00000013807 BAIAP3O94812 1187 aa18.41■□□□□ 0.54
ERCC1-201ENST00000013807 ANTXR2P58335 489 aa18.41■□□□□ 0.54
ERCC1-201ENST00000013807 CELF3Q5SZQ8 465 aaKnown RBP18.41■□□□□ 0.54
ERCC1-201ENST00000013807 DEFB128Q7Z7B8 93 aa18.41■□□□□ 0.54
ERCC1-201ENST00000013807 RALYLQ86SE5 291 aaKnown RBP18.41■□□□□ 0.54
ERCC1-201ENST00000013807 PIGSQ96S52 555 aa18.41■□□□□ 0.54
ERCC1-201ENST00000013807 FRMPD4Q14CM0 1322 aa18.41■□□□□ 0.54
ERCC1-201ENST00000013807 BDP1A6H8Y1 2624 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
ERCC1-201ENST00000013807 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 PSEN2P49810 448 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 RABGGTBP53611 331 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 CHST3Q7LGC8 479 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 CATIPQ7Z7H3 387 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 DHX37Q8IY37 1157 aaKnown RBP18.4■□□□□ 0.54
ERCC1-201ENST00000013807 PPP1R13LQ8WUF5 828 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 DHX38Q92620 1227 aaKnown RBP18.4■□□□□ 0.54
ERCC1-201ENST00000013807 NOD1Q9Y239 953 aa18.4■□□□□ 0.54
ERCC1-201ENST00000013807 ZBBXA8MT70 800 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 STAM2O75886 525 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 CXCL10P02778 98 aa18.39■□□□□ 0.53
ERCC1-201ENST00000013807 HOXA13P31271 388 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-201ENST00000013807 SP2Q02086 613 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms