RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Rgl2Q61193 778 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ddx31Q6NZQ2 687 aaKnown RBP11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Smarca1Q6PGB8 1046 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ccdc172Q810N9 267 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Cd209bQ8CJ91 325 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Plekhg6Q8R0J1 787 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mis18aQ9CZJ6 204 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mss51Q9D5Z5 446 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 EhhadhQ9DBM2 718 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tmem191cQ9JJB1 302 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ddx23D3Z0M9 819 aaKnown RBP11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Lrrc32G3XA59 663 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Pbx1P41778 430 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Psg29Q3URN6 468 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Kcnj11Q61743 390 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tmc4Q7TQ65 694 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Map3k11Q80XI6 850 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Bbs9Q811G0 885 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Traf3ip3Q8C0G2 513 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Prpf6Q91YR7 941 aaKnown RBP11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Alpk1Q9CXB8 1231 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Copb1Q9JIF7 953 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Pkd2l2Q9JLG4 621 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 AmfrQ9R049 643 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Pcdh11xF6ZNL5 1338 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Pitpnm2Q6ZPQ6 1335 aa11.64□□□□□ -0.55
Ptpre-208ENSMUST00000211788 StrcQ8VIM6 1809 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Apol8A2VDH7 339 aaKnown RBP11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ugt1a8D3Z748 530 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ugt1a10E9PXN7 530 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Skap1Q3UUV5 355 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 WaplQ65Z40 1200 aaKnown RBP11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Asic1Q6NXK8 526 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Arhgef19Q8BWA8 802 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mettl5Q8K1A0 209 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mageb16Q9CWV4 363 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Prl2c5Q9JLV9 222 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Rsbn1lD3Z0K6 821 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Birc5O70201 140 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Stim1P70302 685 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ccdc138Q0VF22 680 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Eif3j1Q3UGC7 261 aaKnown RBP11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tsr1Q5SWD9 803 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tbc1d1Q60949 1255 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Eif3j2Q66JS6 263 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Krt87Q6IMF0 495 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 PigsQ6PD26 555 aaKnown RBP11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Trim9Q8C7M3 817 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mphosph6Q9D1Q1 161 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mfap3lQ9D3X9 409 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ccdc97Q9DBT3 340 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tlr9Q9EQU3 1032 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Sertad1Q9JL10 236 aa11.63□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Flvcr1B2RXV4 560 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Trove2O08848 538 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Folh1O35409 752 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Parp1P11103 1013 aaKnown RBP11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Nub1P54729 614 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Evi5P97366 809 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Prom2Q3UUY6 835 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Islr2Q5RKR3 745 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Klra6Q60653 266 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Igbp1Q61249 340 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 BC048507Q80ZS7 89 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ppfibp1Q8C8U0 969 aaKnown RBP11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tmem63cQ8CBX0 802 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ushbp1Q8R370 680 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 MymkQ9D1N4 221 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Krt34Q9D646 392 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Git2Q9JLQ2 708 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ccnt1Q9QWV9 724 aaKnown RBP11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Abhd2Q9QXM0 425 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Plcb1Q9Z1B3 1216 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Btaf1E9QAE3 1848 aa11.62□□□□□ -0.55
Ptpre-208ENSMUST00000211788 GabreA2AMW3 916 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Zfand4D3Z3C6 739 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Dnajc21E9Q8D0 531 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 CidebO70303 219 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Lmnb2P21619 596 aaKnown RBP11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ca8P28651 291 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ssrp1Q08943 708 aaKnown RBP11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Rnf40Q3U319 1001 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Lamc2Q61092 1191 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 3830417A13RikQ8BQJ2 303 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Tcp11l2Q8K1H7 517 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Exoc1Q8R3S6 894 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Ces1Q8VCC2 565 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Dnajc19Q9CQV7 116 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Klhl10Q9D5V2 608 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Cul5Q9D5V5 780 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Gm5580A0A0N4SVP8 411 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Gm5934D3Z4U6 212 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Sept2P42208 361 aaKnown RBP11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Mybl2P48972 704 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Gng11P61953 73 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Foxn3Q499D0 457 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Akap4Q60662 849 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Trim25Q61510 634 aaKnown RBP11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Insm1Q63ZV0 521 aa11.61□□□□□ -0.55
Ptpre-208ENSMUST00000211788 Kdm1aQ6ZQ88 853 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms