RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rrp1bQ91YK2 724 aaKnown RBP6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ddah1Q9CWS0 285 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Serpinb12Q9D7P9 423 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Pard6gQ9JK84 382 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cd2apQ9JLQ0 637 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 DonsonQ9QXP4 560 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 SmapQ9R0P4 181 aaKnown RBP6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Prdm11A2AGX3 565 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cfap70D3YVL2 1141 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ppp1r9aH3BJD6 1292 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tpp1O89023 562 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 RcvrnP34057 202 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Mcm6P97311 821 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Slc9a2Q3ZAS0 814 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Sema4bQ62179 823 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tekt3Q6X6Z7 490 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ildr1Q8CBR1 537 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Kcnq3Q8K3F6 873 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nod2Q8K3Z0 1020 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 HibadhQ99L13 335 aaKnown RBP6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Thap2Q9D305 217 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tnip1Q9WUU8 647 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Col11a2Q64739 1736 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 A0A1Y7VML8 143 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Vmn2r68L7N2B3 851 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 MthfslL7N466 203 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nfil3O08750 462 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fdx1P46656 188 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Rpusd2Q149F1 553 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ccbe1Q3MI99 408 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ddx49Q4FZF3 480 aaKnown RBP6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nsrp1Q5NCR9 542 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Sun3Q5SS91 320 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Myo19Q5SV80 963 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Lamb3Q61087 1168 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Igbp1Q61249 340 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Soat1Q61263 540 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ctnna3Q65CL1 895 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Usp49Q6P9L4 685 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cct8l1Q80YT3 562 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Slc17a8Q8BFU8 601 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ipo5Q8BKC5 1097 aaKnown RBP6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tmem60Q8K174 133 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 P3h4Q8K2B0 443 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Znrd1-asQ8R0E5 213 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Vmn1r218Q8R261 298 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 RtcbQ99LF4 505 aaKnown RBP6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Coro7Q9D2V7 922 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 4933428M09RikQ9D3X3 192 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ccdc70Q9D9B0 223 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Plxnb2B2RXS4 1842 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 MeiocA2AG06 965 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Palm3A2TJV2 734 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Il7P10168 154 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ifrd1P19182 449 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 LtbrP50284 415 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Acot10Q32MW3 439 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ccdc33Q3ULW6 985 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ccdc157Q5SPX1 718 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Scnn1aQ61180 699 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Otop3Q80UF9 577 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Epn1Q80VP1 575 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Dact1Q8R4A3 778 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Luc7lQ9CYI4 371 aaKnown RBP6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Lgr5Q9Z1P4 907 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Krt78E9Q0F0 1068 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gm5134E9QAB5 671 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Apol10bG3X9K7 334 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Kifc2O08672 792 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Jakmip3Q5DTN8 844 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ddx3yQ62095 658 aaKnown RBP6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Sh3gl3Q62421 347 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 GnptabQ69ZN6 1235 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gpbp1Q6NXH3 473 aaKnown RBP6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Mpp4Q6P7F1 635 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fmnl3Q6ZPF4 1028 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gtse1Q8R080 741 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Arl8aQ8VEH3 186 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Sh2b1Q91ZM2 756 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nlrp5Q9R1M5 1163 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Clip2Q9Z0H8 1047 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Psma7Q9Z2U0 248 aa6.91□□□□□ -1.3
Lig4-202ENSMUST00000170033 Grik3B1AS29 919 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gm10134F6ZQC6 126 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tom1O88746 492 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Stim2P83093 746 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tnfaip8l3Q3TBL6 204 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 MycbpapQ5SUV2 932 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Q6PD19 689 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ip6k2Q80V72 448 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Smim5Q8BT42 78 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Trim9Q8C7M3 817 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Stn1Q8K2X3 378 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cyp2c50Q91X77 490 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cabp7Q91ZM8 215 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Lonrf3Q9D4H7 753 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fam217aQ9D9W6 419 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cwc15Q9JHS9 229 aaKnown RBP6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 AmfrQ9R049 643 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Slfn14V9GXG1 899 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms