RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Efhd1Q9D4J1 240 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Rfpl4bJ3QPR6 266 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Dync1i1O88485 628 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Mettl14Q3UIK4 456 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Exoc1Q8R3S6 894 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Q9DAQ4 598 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tjp3Q9QXY1 905 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 EmbP21995 330 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Kifap3P70188 793 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Foxd1Q61345 456 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Acat1Q8QZT1 424 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 CenpqQ9CPQ5 267 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Mis18aQ9CZJ6 204 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tubb4aQ9D6F9 444 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Copb1Q9JIF7 953 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Zfand4D3Z3C6 739 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ugt1a8D3Z748 530 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ugt1a10E9PXN7 530 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Esr2O08537 530 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Pola2P33611 600 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Acot10Q32MW3 439 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Eif3j2Q66JS6 263 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Krt74Q6IFZ9 495 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Sdccag8Q80UF4 717 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ddx19bQ8BZY3 494 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Dennd2aQ8C4S8 1000 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ascc2Q91WR3 749 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ccdc191J3QQ27 883 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 GabpaQ00422 454 aa17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Dhx30Q99PU8 1217 aaKnown RBP17.7■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gm7168A0AUV4 508 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Mapk4Q6P5G0 583 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ano2Q8CFW1 1002 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Cd209bQ8CJ91 325 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Rhobtb3Q9CTN4 611 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Klhl40Q9D783 621 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nap1l5Q9JJF0 156 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 SisF8VQM5 1818 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 PatjQ63ZW7 1834 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 ThbdP15306 577 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Traf1P39428 409 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Scaf8Q6DID3 1268 aa17.69■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gm5934D3Z4U6 212 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Psmc2P46471 433 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 ArsiQ32KI9 573 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 C8aQ8K182 587 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 AacsQ9D2R0 672 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Pabpc6Q9D4E6 643 aaKnown RBP17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Cry2Q9R194 592 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nfatc2ipO09130 412 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Irf6P97431 467 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Grik5Q61626 979 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nop9Q8BMC4 636 aaKnown RBP17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gprc5cQ8K3J9 440 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Nr3c2Q8VII8 978 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Atp5c1Q91VR2 298 aaKnown RBP17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Lekr1B2RVN1 116 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Mmp20P57748 482 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Q8C5C9 218 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ago4Q8CJF8 861 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tcp11l2Q8K1H7 517 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tacc2Q9JJG0 1149 aa17.68■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gm15448F6PZL4 682 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tal1P22091 329 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Mrps31Q61733 384 aaKnown RBP17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 P2ry10Q8BFU7 328 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Hirip3Q8BLH7 601 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Serpinb12Q9D7P9 423 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Lypla2Q9WTL7 231 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Eif2ak1Q9Z2R9 619 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Lrrc55Q3UY51 311 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Thrap3Q569Z6 951 aaKnown RBP17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Cnot7Q60809 285 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Jade2Q6ZQF7 829 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ccdc105Q9D4K7 499 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tmod2Q9JKK7 351 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 AmfrQ9R049 643 aa17.67■□□□□ 0.42
Trim39-203ENSMUST00000113706 Has3O08650 554 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Pls1Q3V0K9 630 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Taf3Q5HZG4 932 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Lamb3Q61087 1168 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Igbp1Q61249 340 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 CnstQ8CBC4 711 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Ces4aQ8R0W5 563 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 CrygnQ8VHL5 183 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Josd2Q9CR30 188 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gm5580A0A0N4SVP8 411 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 MtrA6H5Y3 1253 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Brd9Q3UQU0 596 aaKnown RBP17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Coa7Q921H9 231 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Syce1Q9D495 329 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Sapcd2Q9D818 391 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Gm3095E9Q058 166 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Parp2O88554 559 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Tfcp2l1Q3UNW5 479 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Dnph1Q80VJ3 173 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Mrps5Q99N87 432 aaKnown RBP17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 BcamQ9R069 622 aa17.66■□□□□ 0.42
Trim39-203ENSMUST00000113706 Fyb2A2A995 729 aa17.65■□□□□ 0.42
Trim39-203ENSMUST00000113706 CfhP06909 1234 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms