RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Zbed4Q80WQ9 1168 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Dhx38Q80X98 1228 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Catsper4Q8BVN3 442 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 DpydQ8CHR6 1025 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Nudt13Q8JZU0 352 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Retreg1dQ8VE91 480 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Tmco1Q921L3 188 aaKnown RBP13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Foxp3Q99JB6 429 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Ndufb5Q9CQH3 189 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Raph1F2Z3U3 1266 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Ctnnal1O88327 731 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Prr18Q6PAN7 307 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Msl1Q6PDM1 616 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Slc4a8Q8JZR6 1089 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 LzicQ8K3C3 190 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 ZwilchQ8R060 589 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Cbx6Q9DBY5 414 aa13.03□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Cdk12Q14AX6 1484 aaKnown RBP13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Tagap1P0CAX8 505 aa13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Pkp1P97350 728 aaKnown RBP13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Gnat3Q3V3I2 354 aa13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Dpf2Q61103 391 aaKnown RBP13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Ankk1Q8BZ25 745 aa13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Tldc1Q8K0P3 455 aa13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Ddx47Q9CWX9 455 aaKnown RBP13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Prpf40aQ9R1C7 953 aaKnown RBP13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Igsf1Q7TQA1 1317 aa13.02□□□□□ -0.32
Bdnf-205ENSMUST00000111045 Ankle2Q6P1H6 964 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ythdf3Q8BYK6 585 aaKnown RBP13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 GptQ8QZR5 496 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Plekha4Q8VC98 588 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Nsmce3Q9CPR8 279 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Sesn3Q9CYP7 492 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Phkg2Q9DB30 406 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 PigbQ9JJQ0 542 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Mzf1S4R1L6 814 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ccdc163A2AGD7 326 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Slfn8B1ARD8 910 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Otud7bB2RUR8 840 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Lmnb2P21619 596 aaKnown RBP13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Serpina1bP22599 413 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Usp4P35123 962 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Vps54Q5SPW0 977 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hps3Q91VB4 1002 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Alg1Q921Q3 482 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ptdss1Q99LH2 473 aaKnown RBP13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Fmnl1Q9JL26 1094 aa13.02□□□□□ -0.33
Bdnf-205ENSMUST00000111045 ClppO88696 272 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hoxa7P02830 229 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Mphosph8Q3TYA6 858 aaKnown RBP13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Map3k9Q3U1V8 1077 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Sorbs1Q62417 1290 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Haus1Q8BHX1 278 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Pcdh18Q8VHR0 1134 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Slc13a1Q9JHI4 594 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Sorbs3Q9R1Z8 733 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Gm5936A2BG95 728 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Gm5640A3KG49 728 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Gm3383J3QQ59 259 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Gm3164L7N2B9 238 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Gm3239L7N2D9 227 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 CrcpO35427 148 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ncam1P13595 1115 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hand2Q61039 217 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Psd4Q8BLR5 1005 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 SdsQ8VBT2 327 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Cep19Q9CQA8 163 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Q9CYI0 393 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ttll7A4Q9F0 912 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Art2bO35975 289 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Krt86P97861 486 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Slc10a4Q3UEZ8 437 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Spa17Q62252 149 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Tbc1d30Q69ZT9 766 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ripor2Q80U16 1078 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Sptlc3Q8BG54 563 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 DymQ8CHY3 669 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Rev1Q920Q2 1249 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Eps8l2Q99K30 729 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hsf2bpQ9D4G2 338 aa13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Polr2dQ9D7M8 142 aaKnown RBP13.01□□□□□ -0.33
Bdnf-205ENSMUST00000111045 AdgbG3UZ78 1657 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Eno1P17182 434 aaKnown RBP13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Adora1Q60612 326 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Olfr301Q7TS04 311 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Tmem87bQ8BKU8 555 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ssfa2Q922B9 1252 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Trp53inp1Q9QXE4 239 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Lgr5Q9Z1P4 907 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 CemipQ8BI06 1361 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ugt1a6bK9J7B2 531 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Atp9aO70228 1047 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Cbfa2t2O70374 594 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Xrcc5P27641 732 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ncoa4Q5U4H9 625 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ugt1a6Q64435 531 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Acap3Q6NXL5 833 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ugt1a7cQ6ZQM8 531 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Tyw3Q8BSA9 257 aa13□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Prkag2Q91WG5 566 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms