RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Gna11P21278 359 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Vcam1P29533 739 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Lrrc55Q3UY51 311 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Jade2Q6ZQF7 829 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Lrrc41Q8K1C9 807 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Znf131Q8K3J5 619 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Znrd1-asQ8R0E5 213 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Hs2st1Q8R3H7 356 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 TxlnbQ8VBT1 685 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ces1Q8VCC2 565 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Lzts2Q91YU6 671 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Kctd10Q922M3 315 aa10.63□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Otud7bB2RUR8 840 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Usp17lbE9Q9U0 468 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 LdhaP06151 332 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 RaraP11416 462 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Snap25P60879 206 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ssrp1Q08943 708 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Gcnt1Q09324 428 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 ItgadQ3V0T4 1168 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Tmem232Q5K6N0 675 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 PrimpolQ6P1E7 537 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Kdm1aQ6ZQ88 853 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Snd1Q78PY7 910 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Apopt1Q9CQW7 192 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Grik3B1AS29 919 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Cnbd1B1AWM0 430 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 C2cd2E9Q3C1 696 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 UncxO08934 530 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 SarsP26638 512 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Nedd4P46935 887 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Slc8a1P70414 970 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Cct6aP80317 531 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ppp1r7Q3UM45 361 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Haus6Q6NV99 933 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Sdad1Q80UZ2 687 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Znf18Q810A1 556 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 NkrfQ8BY02 690 aaKnown RBP10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Hgh1Q8C3I8 393 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ppp1r3gQ9CW07 347 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Alpk1Q9CXB8 1231 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Sept14Q9DA97 430 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Inpp4aQ9EPW0 939 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Actn2Q9JI91 894 aa10.62□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Chrna9G3X8Z7 479 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Slc2a13Q3UHK1 637 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Fam198bQ3UPI1 517 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Brsk2Q69Z98 735 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Gga2Q6P5E6 603 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ppfibp1Q8C8U0 969 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 HyiQ8R1F5 277 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Atxn7Q8R4I1 867 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Atp1a1Q8VDN2 1023 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Rrp1bQ91YK2 724 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Mtmr2Q9Z2D1 643 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Col5a2Q3U962 1497 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Gm7168A0AUV4 508 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Eps15P42567 897 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 LbrQ3U9G9 626 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Slc9a2Q3ZAS0 814 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 HrQ61645 1182 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Mcm7Q61881 719 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Fkbp3Q62446 224 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Utp14bQ6EJB6 756 aaKnown RBP10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Exoc8Q6PGF7 716 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Rab11fip4Q8BQP8 635 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Dennd2aQ8C4S8 1000 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Spata4Q8K3V1 295 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Srgap2Q91Z67 1071 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ears2Q9CXJ1 523 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Pkd2l2Q9JLG4 621 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 ErmapQ9JLN5 566 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Dnajc7Q9QYI3 494 aa10.61□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Pitpnm2Q6ZPQ6 1335 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Lbhd1A0A087WPA0 259 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Scgb2b11A0A087WR49 112 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Rsbn1lD3Z0K6 821 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Nck2O55033 380 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Scp2P32020 547 aaKnown RBP10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Dnm2P39054 870 aaKnown RBP10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Foxd1Q61345 456 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Pim2Q62070 370 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Cdc23Q8BGZ4 597 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ythdf3Q8BYK6 585 aaKnown RBP10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Cacnb1Q8R3Z5 597 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Xrcc4Q924T3 326 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Krt34Q9D646 392 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Calr3Q9D9Q6 380 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Tmem191cQ9JJB1 302 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Ccnt1Q9QWV9 724 aaKnown RBP10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 ErmardE9Q048 622 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Rasa2P58069 847 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Tmem35bQ3U0Y2 150 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Nell2Q61220 819 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 MmeQ61391 750 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Krt87Q6IMF0 495 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 PigsQ6PD26 555 aaKnown RBP10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Map3k11Q80XI6 850 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 PreplQ8C167 725 aa10.6□□□□□ -0.71
Cpsf3-201ENSMUST00000067284 Cdan1Q8CC12 1239 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms