RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Gm5580A0A0N4SVP8 411 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Pstpip1P97814 415 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tnfaip8l3Q3TBL6 204 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Rgl1Q60695 768 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Zfp341Q6PGC9 846 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Jade2Q6ZQF7 829 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Prpf40bQ80W14 870 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Dennd2aQ8C4S8 1000 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Lman1lQ8VCD3 505 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Eif2ak1Q9Z2R9 619 aa25.64■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gm45208A0A140LJ36 292 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Traf1P39428 409 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 GmpsQ3THK7 693 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Slc4a8Q8JZR6 1089 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Frat2Q8K025 231 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Nek9Q8K1R7 984 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Pabpc6Q9D4E6 643 aaKnown RBP25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Uso1Q9Z1Z0 959 aaKnown RBP25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Nsun7Q14AW5 724 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Acat1Q8QZT1 424 aa25.63■■□□□ 1.69
Cln6-201ENSMUST00000034776 Rnf216P58283 853 aa25.62■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gm11437Q5QR91 290 aa25.62■■□□□ 1.69
Cln6-201ENSMUST00000034776 Cep95Q8BVV7 827 aa25.62■■□□□ 1.69
Cln6-201ENSMUST00000034776 Etf1Q8BWY3 437 aaKnown RBP25.62■■□□□ 1.69
Cln6-201ENSMUST00000034776 Ago4Q8CJF8 861 aa25.62■■□□□ 1.69
Cln6-201ENSMUST00000034776 Abcb4P21440 1276 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Ric8aQ3TIR3 530 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Oog3Q3UWY1 500 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 CtcfQ61164 736 aaKnown RBP25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Eif3j2Q66JS6 263 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Cracr2bQ80ZJ8 394 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tcp11l2Q8K1H7 517 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tjp3Q9QXY1 905 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 PfasQ5SUR0 1337 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gm4985A2ALC6 410 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gm3095E9Q058 166 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gm10378F6XQQ1 160 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Samsn1P57725 372 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tpm1P58771 284 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Hmgb1P63158 215 aaKnown RBP25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 PtgdrP70263 357 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Rexo1Q7TT28 1213 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Atp5c1Q91VR2 298 aaKnown RBP25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Haus2Q9CQS9 234 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Usp21Q9QZL6 566 aa25.61■■□□□ 1.69
Cln6-201ENSMUST00000034776 Pip4k2aO70172 405 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Orc4O88708 433 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 AgtP11859 477 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Kif5bQ61768 963 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 P2ry10Q8BFU7 328 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 D130040H23RikQ8BII3 405 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Slc18a1Q8R090 521 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Nr3c2Q8VII8 978 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 March8Q9DBD2 286 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Cry2Q9R194 592 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Etnk2A7MCT6 385 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Prl2c3P04768 224 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 SarsP26638 512 aaKnown RBP25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Pola2P33611 600 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Psmc6P62334 389 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 NyxP83503 476 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 KhsrpQ3U0V1 748 aaKnown RBP25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gtpbp6Q3U6U5 514 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Mcm7Q61881 719 aaKnown RBP25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Fbxo10Q7TQF2 950 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Drd5Q8BLD9 478 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gprc5cQ8K3J9 440 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Klhl10Q9D5V2 608 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 CsadQ9DBE0 493 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Elf2Q9JHC9 593 aa25.6■■□□□ 1.69
Cln6-201ENSMUST00000034776 Gm15448F6PZL4 682 aa25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Dnm2P39054 870 aaKnown RBP25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tmem35bQ3U0Y2 150 aa25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 L1td1Q587J6 782 aaKnown RBP25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Sass6Q80UK7 654 aa25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Phf20Q8BLG0 1010 aaKnown RBP25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Lrrc41Q8K1C9 807 aa25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Coa7Q921H9 231 aa25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Josd2Q9CR30 188 aa25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 RnmtQ9D0L8 465 aaKnown RBP25.59■■□□□ 1.69
Cln6-201ENSMUST00000034776 Pagr1bF6V0H0 108 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Chrna9G3X8Z7 479 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Brd9Q3UQU0 596 aaKnown RBP25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Thrap3Q569Z6 951 aaKnown RBP25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Grik5Q61626 979 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Sp4Q62445 782 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Mindy1Q76LS9 468 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Cyp4f39Q8BGU0 532 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Yars2Q8BYL4 472 aaKnown RBP25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Cd209bQ8CJ91 325 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Kdm4bQ91VY5 1086 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Pagr1aQ99L02 253 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 CutaQ9CQ89 177 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Apopt1Q9CQW7 192 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tube1Q9D6T1 475 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Card6E9PWH2 1175 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tom1l2Q5SRX1 507 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Znf280dQ68FE8 974 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Tmc3Q7TQ69 1130 aa25.58■■□□□ 1.69
Cln6-201ENSMUST00000034776 Desi2Q9D291 194 aa25.58■■□□□ 1.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms