RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Fkbp6Q91XW8 327 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Trim16Q99PP9 556 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gstt4Q9D4P7 240 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Dnajb7Q9QYI8 312 aa25.04■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Casp2P29594 452 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Stn1Q8K2X3 378 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Prpf3Q922U1 683 aaKnown RBP25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ndst4Q9EQW8 872 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Il15P48346 162 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gm4981Q3ULJ8 291 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 SrlQ7TQ48 910 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Nek8Q91ZR4 698 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 MlxiplQ99MZ3 864 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Olfm3P63056 478 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ddx3yQ62095 658 aaKnown RBP25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Creb3l3Q91XE9 479 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Dbndd1Q9CZ00 160 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gngt2Q61017 69 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 CgasQ8C6L5 507 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 CnstQ8CBC4 711 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Nrbp2Q91V36 499 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Tmco4Q91WU4 631 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Llcfc1Q9D9P8 108 aa25.03■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Cep126Q0VBV7 1103 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ccdc24E9PUW8 296 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Krt78E9Q0F0 1068 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ect2Q07139 913 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Usp35M0QWN7 1009 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Fbxo11Q7TPD1 930 aaKnown RBP25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Psip1Q99JF8 528 aaKnown RBP25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ppil4Q9CXG3 492 aaKnown RBP25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Snx12O70493 165 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pfdn4Q3UWL8 134 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Zfyve19Q9DAZ9 389 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gpaa1Q9WTK3 621 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Cyb5rlB1AS42 316 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Gm1661E9Q963 441 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 NppbP40753 121 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 TxkP42682 527 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Vav2Q60992 868 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Nacc1Q7TSZ8 514 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Hps6Q8BLY7 805 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Ranbp17Q99NF8 1088 aa25.02■■□□□ 1.6
Sh3rf1-201ENSMUST00000034060 Pcif1P59114 706 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Mettl17Q3U2U7 461 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Yipf3Q3UDR8 347 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Ppp2r2aQ6P1F6 447 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Polr3cQ9D483 533 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Gm21962L7N280 338 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 DbnlQ62418 436 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Clec4gQ8BNX1 294 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Q8BWG4 1187 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 4930504O13RikQ8C5Z9 145 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Nde1Q9CZA6 344 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 1700013D24RikQ0P521 120 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Prpf38aQ4FK66 312 aaKnown RBP25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 DohhA0A1Y7VJ29 135 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 XpcP51612 930 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Zscan2Q07230 614 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Ppp2r5dQ91V89 594 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Syngap1F6SEU4 1340 aa25.01■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Serpina1bP22599 413 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Ckap2Q3V1H1 664 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Krt5Q922U2 580 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Tgs1Q923W1 853 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Dhx58Q99J87 678 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Dbndd2Q9CRD4 158 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 NkapQ9D0F4 415 aaKnown RBP25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Tmem191cQ9JJB1 302 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Stk39Q9Z1W9 556 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Frmpd4A2AFR3 1320 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Maml3D4QGC2 1135 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Gad1P48318 593 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Tmtc1Q3UV71 942 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Q80ZQ3 298 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Foxp3Q99JB6 429 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Snrnp35Q9D384 244 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 AceP09470 1312 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Ptch1Q61115 1434 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Apol6B7ZC55 329 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Fgfr1op2Q9CRA9 253 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Pcdhb9E9Q5G2 828 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Tgfb1i1Q62219 461 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Cnksr2Q80YA9 1032 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Vipas39Q8BGQ1 491 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Ints9Q8K114 658 aaKnown RBP25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Rpap2Q8VC34 614 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 StrbpQ91WM1 672 aaKnown RBP25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Pcdhb12Q91Y07 789 aa25■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Mcf2A2AEU1 1111 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Prpsap2Q8R574 369 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Zkscan3Q91VW9 553 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Paip2bQ91W45 136 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Hps4Q99KG7 671 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Uhrf1bp1lA2RSJ4 1457 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Gm28360A0A087WR25 190 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Sema3fO88632 785 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Arhgef1Q61210 920 aaKnown RBP24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 BcrQ6PAJ1 1270 aa24.99■■□□□ 1.59
Sh3rf1-201ENSMUST00000034060 Pls3Q99K51 630 aa24.99■■□□□ 1.59
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms