RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Cpsf2O35218 782 aaKnown RBP13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Stag2O35638 1231 aa13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Zbtb7bQ64321 544 aa13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Ube3cQ80U95 1083 aa13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Snip1Q8BIZ6 383 aaKnown RBP13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Taok3Q8BYC6 898 aa13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Dr1Q91WV0 176 aa13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Rps6ka4Q9Z2B9 773 aa13.52□□□□□ -0.24
Pdlim5-201ENSMUST00000029941 Cdc27A2A6Q5 825 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 CebpaP53566 359 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Krt86P97861 486 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Vipas39Q8BGQ1 491 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 RaraP11416 462 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Mier3Q3UHF3 551 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 WaplQ65Z40 1200 aaKnown RBP13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Msl1Q6PDM1 616 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Srp68Q8BMA6 625 aaKnown RBP13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Zcrb1Q9CZ96 217 aaKnown RBP13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tube1Q9D6T1 475 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Cib2Q9Z309 187 aa13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rbm6S4R1W5 1118 aaKnown RBP13.52□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 RictorQ6QI06 1708 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Pcdh11xF6ZNL5 1338 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 C3P01027 1663 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gm7168A0AUV4 508 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tdo2P48776 406 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Csgalnact2Q8C1F4 542 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Stoml1Q8CI66 399 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Mxra7Q9CZH7 178 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Arl2bpQ9D385 163 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Q9DAQ4 598 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Idh1O88844 414 aaKnown RBP13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Fhdc1Q3ULZ2 1149 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sec31aQ3UPL0 1230 aaKnown RBP13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Carmil2Q3V3V9 1296 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Slc30a9Q5IRJ6 567 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Spata32Q8C5V0 334 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 H6pdQ8CFX1 789 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Etnk1Q9D4V0 363 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tex13c2A0A0G2JGA3 530 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ankrd63A2ARS0 390 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Psmd14O35593 310 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Parp2O88554 559 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ccdc92bQ5SUE3 299 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ccdc125Q5U465 500 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 KhnynQ80U38 671 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Zcchc8Q9CYA6 709 aaKnown RBP13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Col14a1Q80X19 1797 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Fam207aP58468 219 aaKnown RBP13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Skap1Q3UUV5 355 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 E330017A01RikQ8BU47 192 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Yars2Q8BYL4 472 aaKnown RBP13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Stap2Q8R0L1 411 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Mis12Q9CY25 206 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ddx25Q9QY15 484 aa13.51□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Camta1A2A891 1682 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Krt19P19001 403 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ctnnd1P30999 938 aaKnown RBP13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Foxn3Q499D0 457 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sorbs1Q62417 1290 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Git1Q68FF6 770 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ddx31Q6NZQ2 687 aaKnown RBP13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Smarca1Q6PGB8 1046 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Snx14Q8BHY8 964 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ccdc15Q8C9M2 810 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Appl2Q8K3G9 662 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Slc26a7Q8R2Z3 656 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gm4297D3YWB7 211 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Vmn2r79E9Q067 851 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Speer2E9Q9U2 264 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Lrrn2Q6PHP6 730 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Iws1Q8C1D8 766 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Trim9Q8C7M3 817 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Cul1Q9WTX6 776 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Xrcc6P23475 608 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Q3TTJ4 293 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gm10488Q4KL05 212 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Swap70Q6A028 585 aaKnown RBP13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Naa35Q6PHQ8 725 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Nek5Q7TSC3 627 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Eno4Q8C042 619 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Acot11Q8VHQ9 594 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Armc9Q9D2I5 817 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Zfand4D3Z3C6 739 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Zfp408H7BX78 710 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Nr1i3O35627 358 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Pla2g4aP47713 748 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Rsad1Q5SUV1 442 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Morc2bQ8C5W4 1022 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Sox30Q8CGW4 782 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 MycbpQ9EQS3 103 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Peg12Q9WVA7 283 aa13.5□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 AtrnQ9WU60 1428 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Gm7356A0A087WSA6 508 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Naaladl2A0A0N4SUJ3 795 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Nsrp1Q5NCR9 542 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Phf20l1Q8CCJ9 1013 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Ces1Q8VCC2 565 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Cd2apQ9JLQ0 637 aa13.49□□□□□ -0.25
Pdlim5-201ENSMUST00000029941 Tob2Q9JM55 345 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms