RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Aggf1Q7TN31 711 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Fam228aQ8CDW1 299 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Nckap5lQ6GQX2 1323 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gbp4A4UUI3 631 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cyp3a59D3Z2W7 503 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cacna2d1O08532 1103 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 FosP01101 380 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm14819Q62478 212 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rapgef5Q8C0Q9 814 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 CgasQ8C6L5 507 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 H6pdQ8CFX1 789 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Vps37aQ8CHS8 397 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Acot11Q8VHQ9 594 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rbm43Q99J64 343 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pdzd4Q9QY39 772 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm9992B2RWK3 458 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 XlrP05531 208 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Spag6Q3V0U9 509 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Unc93aQ710D3 458 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Catsper1Q91ZR5 686 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ppp1r2Q9DCL8 206 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Nlrp5Q9R1M5 1163 aa4.95□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zbtb11G5E8B9 1050 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 PpargP37238 505 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Phactr1Q2M3X8 580 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Vps54Q5SPW0 977 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Adgrg6Q6F3F9 1165 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Mtmr10Q7TPM9 771 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Klhl29Q80T74 875 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 AsphQ8BSY0 741 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Alpk1Q9CXB8 1231 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cct2P80314 535 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Aifm3Q3TY86 605 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Hpcal4Q8BGZ1 191 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Iqcb1Q8BP00 598 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Palm2Q8BR92 376 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Eps8l1Q8R5F8 716 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Diaph3Q9Z207 1171 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Serpinb6cW4VSP4 379 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Snx12O70493 165 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Actn4P57780 912 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Syne3Q4FZC9 975 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pnma5Q5DTT8 618 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Unc5clQ6R653 518 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 TbcbQ9D1E6 244 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Polr3cQ9D483 533 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Impdh2P24547 514 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 LmnaP48678 665 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Crnkl1P63154 690 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Sema3eP70275 775 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Lrch2Q3UMG5 773 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Krt87Q6IMF0 495 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 NptxrQ99J85 493 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Fam133bQ9CVI2 245 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Abcb6Q9DC29 842 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pik3c2aQ61194 1686 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 MypnQ5DTJ9 1315 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Plekhg2Q6KAU7 1340 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gimap9G3X987 291 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tmem247Q497K7 211 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 RtcbQ99LF4 505 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Wars2Q9CYK1 360 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Senp3Q9EP97 568 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 C1qbpO35658 278 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zfy1P10925 782 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tuba4aP68368 448 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Adora1Q60612 326 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zc4h2Q68FG0 224 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Zkscan8Q8BSL0 588 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Stx19Q8R1Q0 292 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 PapolbQ9WVP6 641 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Lama4P97927 1816 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Atp2b1G5E829 1220 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Chmp6P0C0A3 200 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Parp1P11103 1013 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 EappQ5BU09 281 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Eps15l1Q60902 907 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Krt40Q6IFX3 439 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Asic1Q6NXK8 526 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ccdc159Q8C963 411 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Dgcr8Q9EQM6 773 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ubr1O70481 1757 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pcdhb9E9Q5G2 828 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tmem109Q3UBX0 243 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Znf827Q505G8 1078 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cyp26b1Q811W2 512 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 9230110C19RikQ8CC70 267 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Q8CEZ4 452 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ino80bQ99PT3 375 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Rrp15Q9CYX7 281 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Pdcd6ipQ9WU78 869 aaKnown RBP4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Myo1eE9Q634 1107 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cav1P49817 178 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Myo1fP70248 1099 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 MpndQ3TV65 487 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tmem132eQ6IEE6 982 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Bank1Q80VH0 783 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Tshz3Q8CGV9 1081 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Dync1li1Q8R1Q8 523 aa4.94□□□□□ -1.62
Prkdc-201ENSMUST00000023352 HnrnprQ8VHM5 632 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms