RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 FliiQ9JJ28 1271 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zc3h13E9Q784 1729 aaKnown RBP11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Mcf2A2AEU1 1111 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Snx12O70493 165 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 P3h4Q8K2B0 443 aa11.74□□□□□ -0.53
Ciita-201ENSMUST00000023147 Irx2P81066 474 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 NpeppsQ11011 920 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Slc10a4Q3UEZ8 437 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ccdc185Q3V118 621 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Srrm1Q52KI8 946 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Large2Q5XPT3 690 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Esco1Q69Z69 843 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Znf219Q6IQX8 726 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Magi2Q9WVQ1 1275 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm10354K7N6A0 256 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ica1lQ3TY65 431 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 B4galnt4Q766D5 1034 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Suds3Q8BR65 328 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gimap7Q8R379 293 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Stag1Q9D3E6 1258 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Kansl3A2RSY1 903 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pik3caP42337 1068 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tmod1P49813 359 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 EsrrgP62509 458 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Wdr36Q3TAQ9 899 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ces5aQ6AW46 575 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pm20d1Q8C165 503 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ncoa5Q91W39 579 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Trim16Q99PP9 556 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ror2Q9Z138 944 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Kif20bQ80WE4 1774 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Fen1P39749 378 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Patl1Q3TC46 770 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gnl3Q8CI11 538 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tcp11l2Q8K1H7 517 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Fgd4Q91ZT5 766 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Prpf3Q922U1 683 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ndc80Q9D0F1 642 aaKnown RBP11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Abcc10Q8R4P9 1501 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Kcnk16G5E845 292 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gm4340L7N2C4 268 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nlrp9bQ66X22 1003 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Krt9Q6RHW0 743 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Rcn2Q8BP92 320 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Bag5Q8CI32 447 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cnpy3Q9DAU1 276 aa11.73□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gimd1E9PW74 217 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Lrrc23O35125 340 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Myo1fP70248 1099 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Adcy8P97490 1249 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zfyve27Q3TXX3 415 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ddx3yQ62095 658 aaKnown RBP11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Kiaa1841Q68FF0 718 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Zcwpw1Q6IR42 630 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Ccdc68Q8BVC4 333 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Fam161bQ8CB59 589 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gtf3c6Q9D8P7 227 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 1700109H08RikQ9D9C0 210 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 MefvQ9JJ26 767 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Esr2O08537 530 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Rgs9O54828 675 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gas7Q60780 421 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Slc20a2Q80UP8 656 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Stx19Q8R1Q0 292 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Tc2nQ91XT6 489 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 AdgbG3UZ78 1657 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Arhgef10lA2AWP8 1280 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pde8bE9Q4S1 865 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cyp2d11P24457 504 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pdcd2P46718 343 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 VrtnQ3SYK4 740 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cyp7b1Q60991 507 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 ScocQ78YZ6 125 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Olfr118Q7TRJ6 321 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Trim56Q80VI1 734 aaKnown RBP11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 4932411N23RikQ8C0S0 470 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pard3bQ9CSB4 1203 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Col20a1Q923P0 1320 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 NktrP30415 1453 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Nlrp1bA1Z198 1177 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Mroh9G5E8L9 891 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Usp35M0QWN7 1009 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 XlrP05531 208 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Gucy2cQ3UWA6 1072 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Trim37Q6PCX9 961 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Dars2Q8BIP0 653 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Usp15Q8R5H1 981 aa11.72□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cpb1B2RS76 415 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cyp3a59D3Z2W7 503 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cyp3a25O09158 503 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Eef1bO70251 225 aaKnown RBP11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Stk38lQ7TSE6 464 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Dph5Q9CWQ0 281 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Pus3Q9JI38 481 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Hyou1Q9JKR6 999 aaKnown RBP11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Vmn2r23E9PXI5 849 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Erich2E9Q1A6 463 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 HarsQ61035 509 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Sik3Q6P4S6 1311 aa11.71□□□□□ -0.53
Ciita-201ENSMUST00000023147 Cep104Q80V31 926 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms