RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Usp33Q8R5K2 909 aa20.49■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Dph5Q9CWQ0 281 aa20.49■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Mms22lB1AUR6 1238 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Myo1eE9Q634 1107 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Myo1fP70248 1099 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ccna1Q61456 421 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Rbm15bQ6PHZ5 887 aaKnown RBP20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Sdccag8Q80UF4 717 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ddx20Q9JJY4 825 aaKnown RBP20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Exoc4O35382 975 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ca8P28651 291 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Polr2fP61219 127 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Kcnb1Q03717 857 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 MlxiplQ99MZ3 864 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Nid2O88322 1403 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Casp8O89110 480 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 PcQ05920 1178 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Mindy1Q76LS9 468 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Mcur1Q9CXD6 340 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ccdc182Q9D9C6 152 aa20.48■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Pacsin1Q61644 441 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Dcaf5Q80T85 946 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 FtoQ8BGW1 502 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ppfibp2O35711 882 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Chmp6P0C0A3 200 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Acsbg2Q2XU92 667 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Nhej1Q3KNJ2 295 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Trim80Q3V061 624 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Lrrc36Q3V0M2 755 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ildr1Q8CBR1 537 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Lrrc42Q8R2U7 421 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Dynll2Q9D0M5 89 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Spata17Q9D552 379 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 PtprvP70289 1705 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 C3P01027 1663 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Krt8P11679 490 aaKnown RBP20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Nlrx1Q3TL44 975 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 EregQ61521 162 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 TwistnbQ78WZ7 330 aaKnown RBP20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Usp17leQ7M764 540 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 VillQ91YD6 859 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Serpinb12Q9D7P9 423 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 1700109H08RikQ9D9C0 210 aa20.47■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Slit1Q80TR4 1531 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Gm7168A0AUV4 508 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 1700029H14RikE9PY36 240 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Morc2bQ8C5W4 1022 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ccdc87Q8CDL9 855 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Trub2Q91WG3 331 aaKnown RBP20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Prl2c5Q9JLV9 222 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Myh1Q5SX40 1942 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Eef1dP57776 281 aaKnown RBP20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Gjb6P70689 261 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Krt12Q64291 487 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Znf280dQ68FE8 974 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Kiaa1328Q6NZK5 612 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Stambpl1Q76N33 436 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Jmjd4Q8BFT6 427 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Miga2Q8BK03 593 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 GlyctkQ8QZY2 523 aa20.46■□□□□ 0.87
Ubp1-201ENSMUST00000009885 PrimpolQ6P1E7 537 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ppp2r2aQ6P1F6 447 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 WhrnQ80VW5 918 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Epha10Q8BYG9 1007 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Gpcpd1Q8C0L9 675 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 H6pdQ8CFX1 789 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Ctage5Q8R311 779 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Tex19.1Q99MV2 351 aa20.45■□□□□ 0.87
Ubp1-201ENSMUST00000009885 Tuft1O08970 390 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 PurbO35295 324 aaKnown RBP20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Bnip3O55003 187 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 GartQ64737 1010 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Herc4Q6PAV2 1057 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 PccaQ91ZA3 724 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Mipol1Q9D9F8 279 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cxcl11Q9JHH5 100 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Pacsin2Q9WVE8 486 aaKnown RBP20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Tal1P22091 329 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cep126Q0VBV7 1103 aa20.45■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Phactr4Q501J7 694 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 LnpkQ7TQ95 425 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Rexo1Q7TT28 1213 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ttc22Q8C159 568 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Zmynd10Q99ML0 440 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Ppp1r1bQ60829 194 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Dhx37Q6NZL1 1150 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Celf4Q7TSY6 486 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cnot10Q8BH15 744 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Slfnl1Q8BHW9 410 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Champ1Q8K327 802 aaKnown RBP20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Tbx22Q8K402 517 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Kif17Q99PW8 1038 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Galnt15Q9D2N8 638 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 IqcdQ9D3V1 458 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Myh2G3UW82 1942 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Cd44P15379 778 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 GnaqP21279 359 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Nap1l2P51860 460 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 Slc8a1P70414 970 aa20.44■□□□□ 0.86
Ubp1-201ENSMUST00000009885 SugctQ7TNE1 436 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms