RNA–Protein interactions for RNA: YPR019W

MCM4, Transcript of Essential helicase component of heterohexameric MCM2-7 complexes, yeast

Gene MCM4, Length 2,802 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM4	YPR019W	ARG82	P07250	355 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	MATALPHA1	P0CY06	175 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	HMLALPHA1	P0CY07	175 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	NHP6B	P11633	99 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	CMK2	P22517	447 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	ATP7	P30902	174 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	AGE2	P40529	298 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	FIN1	Q03898	291 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	MYO5	Q04439	1219 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	YDR344C	Q05510	147 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	VPS36	Q06696	566 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	MED2	Q12124	431 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	RRP12	Q12754	1228 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	PMA1	P05030	918 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	RPS3	P05750	240 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	RPL35A	P0CX84	120 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	RPL35B	P0CX85	120 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	POL30	P15873	258 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	ZRC1	P20107	442 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	CIN8	P27895	1000 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	PSO2	P30620	661 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	SRB5	P32585	307 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	PTC2	P39966	464 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	VHS2	P40463	436 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	TOS3	P43637	560 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	RAI1	P53063	387 aa	Known RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	SSU72	P53538	206 aa	Predicted RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	MTG1	Q03151	367 aa	Predicted RBP	4.81	□□□□□ -1.64
MCM4	YPR019W	COX20	Q04935	205 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	ASM4	Q05166	528 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	PIG1	Q06216	648 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	RXT3	Q07458	294 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	INP53	Q12271	1107 aa		4.81	□□□□□ -1.64
MCM4	YPR019W	VPS34	P22543	875 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	YUR1	P26725	428 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	PDB1	P32473	366 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	RAD23	P32628	398 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	TIF3	P34167	436 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	ECM21	P38167	1117 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	IML3	P38265	245 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	SKN7	P38889	622 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	YJL193W	P39542	402 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	ERG10	P41338	398 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	SAD1	P43589	448 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	HIT1	P46973	164 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	SSY5	P47002	699 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	YJL118W	P47022	219 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	TMA22	P47089	198 aa	Predicted RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	SLI1	P53304	468 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	MFM1	Q02783	413 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	YLR040C	Q07988	224 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	SGO1	Q08490	590 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	NCR1	Q12200	1170 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	OSW2	Q12202	724 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	CAR1	P00812	333 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	URK1	P27515	501 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	ADE1	P27616	306 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	PPA2	P28239	310 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	SEC72	P39742	193 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	YIL108W	P40483	696 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	IRC8	P47046	822 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	MTR3	P48240	250 aa	Predicted RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	ARI1	P53111	347 aa	Known RBP	4.8	□□□□□ -1.64
MCM4	YPR019W	TNA1	P53322	534 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	YNL260C	P53846	198 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
MCM4	YPR019W	DCS1	Q06151	350 aa		4.8	□□□□□ -1.64
MCM4	YPR019W	MATALPHA2	P0CY08	210 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	HMLALPHA2	P0CY09	210 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	KRS1	P15180	591 aa	Known RBP	4.79	□□□□□ -1.64
MCM4	YPR019W	RHB1	P25378	209 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	ECT1	P33412	323 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	MRPL16	P38064	232 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	EHT1	P38295	451 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	ULI1	P43604	169 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	STB2	P46679	850 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	BUD9	P53226	547 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	STD1	Q02794	444 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	GPN2	Q08726	347 aa	Predicted RBP	4.79	□□□□□ -1.64
MCM4	YPR019W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
MCM4	YPR019W	GSY2	P27472	705 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
MCM4	YPR019W	MNN2	P38069	597 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	YNG2	P38806	282 aa	Known RBP	4.79	□□□□□ -1.64
MCM4	YPR019W	PIG2	P40187	538 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	IBA57	P47158	497 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	IPI3	P53877	555 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	YMR226C	Q05016	267 aa	Known RBP	4.79	□□□□□ -1.64
MCM4	YPR019W	RAX1	Q08760	435 aa		4.79	□□□□□ -1.64
MCM4	YPR019W	MET16	P18408	261 aa	Predicted RBP	4.78	□□□□□ -1.64
MCM4	YPR019W	VMA16	P23968	213 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	YIM1	P28625	365 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	PEX3	P28795	441 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	UGP1	P32861	499 aa	Known RBP	4.78	□□□□□ -1.64
MCM4	YPR019W	CHK1	P38147	527 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	YMR262W	P38430	313 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	NDC80	P40460	691 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	DPB11	P47027	764 aa	Predicted RBP	4.78	□□□□□ -1.64
MCM4	YPR019W	KAP114	P53067	1004 aa		4.78	□□□□□ -1.64
MCM4	YPR019W	REX4	Q08237	289 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms