RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W RPN2P32565 945 aaKnown RBP4.61□□□□□ -1.67
VPS28YPL065W DHH1P39517 506 aaKnown RBP4.61□□□□□ -1.67
VPS28YPL065W DLD2P46681 530 aaKnown RBP4.61□□□□□ -1.67
VPS28YPL065W YGL108CP53139 140 aa4.61□□□□□ -1.67
VPS28YPL065W ARX1Q03862 593 aaKnown RBP4.61□□□□□ -1.67
VPS28YPL065W YDR131CQ03899 556 aa4.61□□□□□ -1.67
VPS28YPL065W THI20Q08224 551 aa4.61□□□□□ -1.67
VPS28YPL065W ERP4Q12450 207 aa4.61□□□□□ -1.67
VPS28YPL065W MES1P00958 751 aaKnown RBP4.6□□□□□ -1.67
VPS28YPL065W APE1P14904 514 aa4.6□□□□□ -1.67
VPS28YPL065W SPB1P25582 841 aaPredicted RBP4.6□□□□□ -1.67
VPS28YPL065W ECM15P35195 104 aa4.6□□□□□ -1.67
VPS28YPL065W MIC60P36112 540 aa4.6□□□□□ -1.67
VPS28YPL065W YMR147WP40218 223 aaKnown RBP4.6□□□□□ -1.67
VPS28YPL065W YIR014WP40570 242 aa4.6□□□□□ -1.67
VPS28YPL065W VMA13P41807 478 aaKnown RBP4.6□□□□□ -1.67
VPS28YPL065W SCD6P45978 349 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
VPS28YPL065W KTR5P53966 522 aaPredicted RBP4.6□□□□□ -1.67
VPS28YPL065W YML002WP0CF17 737 aa4.59□□□□□ -1.67
VPS28YPL065W SEC62P21825 274 aa4.59□□□□□ -1.67
VPS28YPL065W ADK2P26364 225 aa4.59□□□□□ -1.67
VPS28YPL065W TRS65P32893 560 aa4.59□□□□□ -1.67
VPS28YPL065W VPS17P32913 551 aa4.59□□□□□ -1.67
VPS28YPL065W TUL1P36096 758 aa4.59□□□□□ -1.67
VPS28YPL065W SDS24P38314 527 aa4.59□□□□□ -1.67
VPS28YPL065W OSH3P38713 996 aaKnown RBP4.59□□□□□ -1.67
VPS28YPL065W SSU1P41930 458 aa4.59□□□□□ -1.67
VPS28YPL065W YGR149WP48236 432 aa4.59□□□□□ -1.67
VPS28YPL065W MNP1P53163 194 aaPredicted RBP4.59□□□□□ -1.67
VPS28YPL065W BNI5P53890 448 aaKnown RBP4.59□□□□□ -1.67
VPS28YPL065W SLD5Q03406 294 aa4.59□□□□□ -1.67
VPS28YPL065W VTA1Q06263 330 aa4.59□□□□□ -1.67
VPS28YPL065W PHO92Q06390 306 aa4.59□□□□□ -1.67
VPS28YPL065W SIL1Q08199 421 aa4.59□□□□□ -1.67
VPS28YPL065W ISN1Q99312 450 aa4.59□□□□□ -1.67
VPS28YPL065W YCR051WP25631 222 aa4.58□□□□□ -1.68
VPS28YPL065W RAD14P28519 371 aa4.58□□□□□ -1.68
VPS28YPL065W YIM1P28625 365 aa4.58□□□□□ -1.68
VPS28YPL065W SEC1P30619 724 aaKnown RBP4.58□□□□□ -1.68
VPS28YPL065W AFG1P32317 509 aa4.58□□□□□ -1.68
VPS28YPL065W ATP11P32453 318 aa4.58□□□□□ -1.68
VPS28YPL065W STB6P36085 766 aa4.58□□□□□ -1.68
VPS28YPL065W YBR139WP38109 508 aa4.58□□□□□ -1.68
VPS28YPL065W VPS52P39904 641 aa4.58□□□□□ -1.68
VPS28YPL065W SYG1P40528 902 aa4.58□□□□□ -1.68
VPS28YPL065W OCA1P50946 238 aaPredicted RBP4.58□□□□□ -1.68
VPS28YPL065W IVY1Q04934 453 aa4.58□□□□□ -1.68
VPS28YPL065W PRP16P15938 1071 aaPredicted RBP4.57□□□□□ -1.68
VPS28YPL065W IDH2P28241 369 aaKnown RBP4.57□□□□□ -1.68
VPS28YPL065W RML2P32611 393 aa4.57□□□□□ -1.68
VPS28YPL065W UTR4P32626 227 aa4.57□□□□□ -1.68
VPS28YPL065W FRE1P32791 686 aa4.57□□□□□ -1.68
VPS28YPL065W CSM2P40465 213 aa4.57□□□□□ -1.68
VPS28YPL065W POP1P41812 875 aa4.57□□□□□ -1.68
VPS28YPL065W CFT2Q12102 859 aaPredicted RBP4.57□□□□□ -1.68
VPS28YPL065W RKM5Q12367 367 aa4.57□□□□□ -1.68
VPS28YPL065W RRD2Q12461 358 aa4.57□□□□□ -1.68
VPS28YPL065W DBF4P32325 704 aa4.56□□□□□ -1.68
VPS28YPL065W VMA8P32610 256 aaKnown RBP4.56□□□□□ -1.68
VPS28YPL065W HCS1P34243 683 aa4.56□□□□□ -1.68
VPS28YPL065W THI2P38141 450 aa4.56□□□□□ -1.68
VPS28YPL065W RRP3P38712 501 aaKnown RBP4.56□□□□□ -1.68
VPS28YPL065W YGL082WP53155 381 aa4.56□□□□□ -1.68
VPS28YPL065W IMP4P53941 290 aaKnown RBP4.56□□□□□ -1.68
VPS28YPL065W RLI1Q03195 608 aaKnown RBP4.56□□□□□ -1.68
VPS28YPL065W ERB1Q04660 807 aaKnown RBP4.56□□□□□ -1.68
VPS28YPL065W ROY1Q04847 553 aa4.56□□□□□ -1.68
VPS28YPL065W YLR345WQ06137 509 aa4.56□□□□□ -1.68
VPS28YPL065W YEH2Q07950 538 aa4.56□□□□□ -1.68
VPS28YPL065W SPS4P09937 338 aa4.55□□□□□ -1.68
VPS28YPL065W AMD1P15274 810 aaKnown RBP4.55□□□□□ -1.68
VPS28YPL065W GLK1P17709 500 aaKnown RBP4.55□□□□□ -1.68
VPS28YPL065W ATP10P18496 279 aa4.55□□□□□ -1.68
VPS28YPL065W YCR007CP25354 239 aa4.55□□□□□ -1.68
VPS28YPL065W FUN19P28003 413 aaPredicted RBP4.55□□□□□ -1.68
VPS28YPL065W PRO3P32263 286 aaKnown RBP4.55□□□□□ -1.68
VPS28YPL065W YOX1P34161 385 aa4.55□□□□□ -1.68
VPS28YPL065W YJL068CP40363 299 aa4.55□□□□□ -1.68
VPS28YPL065W GPI1P53306 609 aa4.55□□□□□ -1.68
VPS28YPL065W RMT2Q03305 412 aa4.55□□□□□ -1.68
VPS28YPL065W SYO1Q07395 620 aa4.55□□□□□ -1.68
VPS28YPL065W BRR1Q99177 341 aaPredicted RBP4.55□□□□□ -1.68
VPS28YPL065W AFI1Q99222 893 aa4.55□□□□□ -1.68
VPS28YPL065W CYB2P00175 591 aa4.54□□□□□ -1.68
VPS28YPL065W RHO2P06781 192 aa4.54□□□□□ -1.68
VPS28YPL065W HOM3P10869 527 aa4.54□□□□□ -1.68
VPS28YPL065W REC107P21651 314 aa4.54□□□□□ -1.68
VPS28YPL065W SNT1P25357 1226 aa4.54□□□□□ -1.68
VPS28YPL065W SIP2P34164 415 aaKnown RBP4.54□□□□□ -1.68
VPS28YPL065W YNK1P36010 153 aaKnown RBP4.54□□□□□ -1.68
VPS28YPL065W RIM2P38127 377 aa4.54□□□□□ -1.68
VPS28YPL065W YTA12P40341 825 aa4.54□□□□□ -1.68
VPS28YPL065W IKS1P47042 667 aa4.54□□□□□ -1.68
VPS28YPL065W BNA5Q05979 453 aa4.54□□□□□ -1.68
VPS28YPL065W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
VPS28YPL065W KEL3Q08979 651 aaPredicted RBP4.54□□□□□ -1.68
VPS28YPL065W ISA2Q12425 185 aa4.54□□□□□ -1.68
VPS28YPL065W ERV1P27882 189 aa4.53□□□□□ -1.68
VPS28YPL065W URA7P28274 579 aaKnown RBP4.53□□□□□ -1.68
VPS28YPL065W YME2P32843 850 aa4.53□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms