RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	NBP35	P52920	328 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	MNT2	P53059	558 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	PEX31	P53203	462 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	SXM1	Q04175	944 aa	Known RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	ARA2	Q04212	335 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	YPR114W	Q06107	315 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	MCP2	Q06567	569 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	ARR3	Q06598	404 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	YOL075C	Q08234	1294 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	RPS10A	Q08745	105 aa	Predicted RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SNF8	YPL002C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SNF8	YPL002C	MET16	P18408	261 aa	Predicted RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	GSY2	P27472	705 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	YKT6	P36015	200 aa	Known RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	APD1	P38281	316 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	YHR033W	P38690	423 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	MSR1	P38714	643 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	FSH1	P38777	243 aa	Known RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	LRP1	P38801	184 aa	Known RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	SMF1	P38925	575 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	EDC3	P39998	551 aa	Known RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	LRO1	P40345	661 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	EGD1	Q02642	157 aa	Known RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	SND1	Q04007	877 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	YOL024W	Q08172	172 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	TRE2	Q08693	809 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	RRP6	Q12149	733 aa	Known RBP	4.1	□□□□□ -1.75
SNF8	YPL002C	YLR111W	Q12528	110 aa		4.1	□□□□□ -1.75
SNF8	YPL002C	UBR1	P19812	1950 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	RPS21A	P0C0V8	87 aa	Known RBP	4.09	□□□□□ -1.75
SNF8	YPL002C	MRPL8	P22353	238 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	PPH21	P23594	369 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	SPC110	P32380	944 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	MRP4	P32902	394 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SNF8	YPL002C	LOT5	P34234	306 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	KAP104	P38217	918 aa	Known RBP	4.09	□□□□□ -1.75
SNF8	YPL002C	YHL041W	P38730	149 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	MKT1	P40850	830 aa	Known RBP	4.09	□□□□□ -1.75
SNF8	YPL002C	PMT3	P47190	753 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	SPC105	P53148	917 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	TGL2	P54857	326 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	TIM11	P81449	96 aa	Predicted RBP	4.09	□□□□□ -1.75
SNF8	YPL002C	USA1	Q03714	838 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	GRX8	Q05926	109 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	DIC1	Q06143	298 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	YPR172W	Q06608	200 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	YPL272C	Q08984	517 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	TGS1	Q12052	315 aa		4.09	□□□□□ -1.75
SNF8	YPL002C	INH1	P01097	85 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	RPS3	P05750	240 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	CDC37	P06101	506 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	YPK1	P12688	680 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	PUT4	P15380	627 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	URE2	P23202	354 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	SEC1	P30619	724 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	MF(ALPHA)2	P32435	120 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	KAR9	P32526	644 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	JNM1	P36224	373 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	EFM2	P38347	419 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	SRP72	P38688	640 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	CCT6	P39079	546 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	CFD1	P40558	293 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	TDA10	P42938	290 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	SNZ3	P43545	298 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	SNG1	P46950	547 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	PHO86	P46956	311 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	CTK3	P46963	296 aa	Predicted RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	ASN2	P49090	572 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	YGR237C	P50089	785 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	SNZ2	P53824	298 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	INA17	Q02888	182 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	VHS1	Q03785	461 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	INP2	Q03824	705 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	MTQ2	Q03920	221 aa	Predicted RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	YMR018W	Q04364	514 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	GFD1	Q04839	188 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	VID22	Q05934	901 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	ETT1	Q08421	412 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	AIM41	Q12032	185 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	RDL1	Q12305	139 aa	Known RBP	4.08	□□□□□ -1.76
SNF8	YPL002C	YGR161W-C	Q3E744	92 aa		4.08	□□□□□ -1.76
SNF8	YPL002C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SNF8	YPL002C	KRR1	P25586	316 aa	Predicted RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	MRC1	P25588	1096 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	SPR1	P32603	445 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	NIP100	P33420	868 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	TAF14	P35189	244 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	RRN3	P36070	627 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	RKM3	P38222	552 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	STN1	P38960	494 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	YMR124W	P39523	943 aa	Known RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	YAL037W	P39728	267 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	PAN6	P40459	309 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	MNT3	P40549	630 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	ZIM17	P42844	174 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	YFR018C	P43599	363 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	SIP4	P46954	829 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	YJL132W	P47014	750 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms