RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W RIB4P50861 169 aaPredicted RBP1.93□□□□□ -2.1
HER1YOR227W MPS2P53159 387 aa1.93□□□□□ -2.1
HER1YOR227W DRN1P53255 507 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W VPS62P53285 467 aa1.93□□□□□ -2.1
HER1YOR227W EFM6P53970 246 aa1.93□□□□□ -2.1
HER1YOR227W STD1Q02794 444 aa1.93□□□□□ -2.1
HER1YOR227W COQ9Q05779 260 aa1.93□□□□□ -2.1
HER1YOR227W DUS4Q06063 367 aa1.93□□□□□ -2.1
HER1YOR227W OPT2Q06593 877 aa1.93□□□□□ -2.1
HER1YOR227W YLR413WQ06689 675 aa1.93□□□□□ -2.1
HER1YOR227W YLL007CQ07799 665 aa1.93□□□□□ -2.1
HER1YOR227W RBD2Q12270 262 aa1.93□□□□□ -2.1
HER1YOR227W POM34Q12445 299 aa1.93□□□□□ -2.1
HER1YOR227W ZPS1Q12512 249 aa1.93□□□□□ -2.1
HER1YOR227W DFG16Q99234 619 aa1.93□□□□□ -2.1
HER1YOR227W GAL7P08431 366 aa1.93□□□□□ -2.1
HER1YOR227W CDC6P09119 513 aa1.93□□□□□ -2.1
HER1YOR227W RPS4AP0CX35 261 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W RPS4BP0CX36 261 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W SEC63P14906 663 aa1.93□□□□□ -2.1
HER1YOR227W PUT4P15380 627 aa1.93□□□□□ -2.1
HER1YOR227W APA2P22108 325 aa1.93□□□□□ -2.1
HER1YOR227W FPS1P23900 669 aa1.93□□□□□ -2.1
HER1YOR227W MGR1P25573 417 aa1.93□□□□□ -2.1
HER1YOR227W RFA2P26754 273 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W YBL055CP34220 418 aaPredicted RBP1.93□□□□□ -2.1
HER1YOR227W KES1P35844 434 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W YKL023WP36103 277 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W CCL1P37366 393 aa1.93□□□□□ -2.1
HER1YOR227W RFS1P38234 210 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W ATG14P38270 344 aa1.93□□□□□ -2.1
HER1YOR227W COS111P38308 924 aa1.93□□□□□ -2.1
HER1YOR227W YJL206CP39529 758 aa1.93□□□□□ -2.1
HER1YOR227W CDC40P40968 455 aaPredicted RBP1.93□□□□□ -2.1
HER1YOR227W YJL132WP47014 750 aa1.93□□□□□ -2.1
HER1YOR227W MCM6P53091 1017 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W RTT102P53330 157 aa1.93□□□□□ -2.1
HER1YOR227W DCP2P53550 970 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W ARP5P53946 755 aa1.93□□□□□ -2.1
HER1YOR227W BOP3P53958 396 aa1.93□□□□□ -2.1
HER1YOR227W EGD1Q02642 157 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W CLU1Q03690 1277 aaKnown RBP1.93□□□□□ -2.1
HER1YOR227W TY1A-MR1Q04215 440 aa1.93□□□□□ -2.1
HER1YOR227W MCM21Q06675 368 aa1.93□□□□□ -2.1
HER1YOR227W NCE102Q12207 173 aaRIP-Chip data1.93□□□□□ -2.1not detected
HER1YOR227W GIS3Q12418 502 aa1.93□□□□□ -2.1
HER1YOR227W TRM11Q12463 433 aa1.93□□□□□ -2.1
HER1YOR227W TAO3P40468 2376 aa1.92□□□□□ -2.1
HER1YOR227W ABF1P14164 731 aa1.92□□□□□ -2.1
HER1YOR227W RPB4P20433 221 aaPredicted RBP1.92□□□□□ -2.1
HER1YOR227W TKL1P23254 680 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W MEK1P24719 497 aaPredicted RBP1.92□□□□□ -2.1
HER1YOR227W GRR1P24814 1151 aa1.92□□□□□ -2.1
HER1YOR227W SSE2P32590 693 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W ATP3P38077 311 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W OPY1P38271 328 aa1.92□□□□□ -2.1
HER1YOR227W BZZ1P38822 633 aa1.92□□□□□ -2.1
HER1YOR227W MSS2P40990 351 aa1.92□□□□□ -2.1
HER1YOR227W STB2P46679 850 aa1.92□□□□□ -2.1
HER1YOR227W PAN2P53010 1115 aaPredicted RBP1.92□□□□□ -2.1
HER1YOR227W ADE12P80210 433 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W SPO19Q03029 223 aa1.92□□□□□ -2.1
HER1YOR227W INP2Q03824 705 aa1.92□□□□□ -2.1
HER1YOR227W RPN9Q04062 393 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W PPM1Q04081 328 aa1.92□□□□□ -2.1
HER1YOR227W ARR1Q06596 294 aa1.92□□□□□ -2.1
HER1YOR227W YFT2Q06676 274 aa1.92□□□□□ -2.1
HER1YOR227W HBT1Q07653 1046 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W SEC39Q12745 709 aa1.92□□□□□ -2.1
HER1YOR227W YDR524C-BQ3E6R4 66 aa1.92□□□□□ -2.1
HER1YOR227W IRA1P18963 3092 aa1.92□□□□□ -2.1
HER1YOR227W YPT1P01123 206 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W AAC1P04710 309 aa1.92□□□□□ -2.1
HER1YOR227W RPP1AP05318 106 aaPredicted RBP1.92□□□□□ -2.1
HER1YOR227W SAC7P17121 654 aa1.92□□□□□ -2.1
HER1YOR227W SPO7P18410 259 aa1.92□□□□□ -2.1
HER1YOR227W ARO4P32449 370 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W EFB1P32471 206 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W TUL1P36096 758 aa1.92□□□□□ -2.1
HER1YOR227W YHL017WP38745 532 aa1.92□□□□□ -2.1
HER1YOR227W STN1P38960 494 aa1.92□□□□□ -2.1
HER1YOR227W BAP3P41815 604 aa1.92□□□□□ -2.1
HER1YOR227W MTR3P48240 250 aaPredicted RBP1.92□□□□□ -2.1
HER1YOR227W STR3P53101 465 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W YGL039WP53183 348 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W MTL1P53214 551 aa1.92□□□□□ -2.1
HER1YOR227W BUD9P53226 547 aa1.92□□□□□ -2.1
HER1YOR227W REC102Q02721 264 aa1.92□□□□□ -2.1
HER1YOR227W MRPL1Q04599 285 aa1.92□□□□□ -2.1
HER1YOR227W HOF1Q05080 669 aa1.92□□□□□ -2.1
HER1YOR227W NKP2Q06162 153 aa1.92□□□□□ -2.1
HER1YOR227W RRP12Q12754 1228 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W YLR415CO13578 112 aa1.92□□□□□ -2.1
HER1YOR227W LEU4P06208 619 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W GCD1P09032 578 aaPredicted RBP1.92□□□□□ -2.1
HER1YOR227W RPL3P14126 387 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W SRV2P17555 526 aaKnown RBP1.92□□□□□ -2.1
HER1YOR227W CLC1P17891 233 aa1.92□□□□□ -2.1
HER1YOR227W GLN3P18494 730 aa1.92□□□□□ -2.1
HER1YOR227W DAL81P21657 970 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms