RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	CPR2	P23285	205 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	SPB1	P25582	841 aa	Predicted RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	IDH2	P28241	369 aa	Known RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	YME2	P32843	850 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	SHP1	P34223	423 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	TUL1	P36096	758 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	YKL023W	P36103	277 aa	Known RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	APE3	P37302	537 aa	Known RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	APE4	P38821	490 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	KEL1	P38853	1164 aa	Known RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	YHR210C	P38893	341 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	JEM1	P40358	645 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	TCB2	P48231	1178 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	YGL108C	P53139	140 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	SOL4	P53315	255 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	BUD32	P53323	261 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	OGG1	P53397	376 aa	Predicted RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	SMM1	P53720	384 aa	Known RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	DUG3	P53871	357 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	HEF3	P53978	1044 aa	Known RBP	3.22	□□□□□ -1.89
TSR4	YOL022C	KAP120	Q02932	1032 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	THP1	Q08231	455 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	DAP1	Q12091	152 aa		3.22	□□□□□ -1.89
TSR4	YOL022C	RAD52	P06778	471 aa	Known RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TSR4	YOL022C	GLN3	P18494	730 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	OPI1	P21957	404 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	SGV1	P23293	657 aa	Known RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	MNE1	P24720	663 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	TFB1	P32776	642 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	TRS65	P32893	560 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	SPC34	P36131	295 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	RIM2	P38127	377 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	THI2	P38141	450 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	LAG1	P38703	411 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	TIF4631	P39935	952 aa	Known RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	YER130C	P39959	443 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	YMR147W	P40218	223 aa	Known RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	AZF1	P41696	914 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	CAK1	P43568	368 aa	Predicted RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	CRZ1	P53968	678 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	OAZ1	Q02803	292 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	YDR415C	Q04033	374 aa	Predicted RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	SCW10	Q04951	389 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	DON1	Q05610	365 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	RDR1	Q08904	546 aa		3.21	□□□□□ -1.9
TSR4	YOL022C	PDH1	Q12428	516 aa	Known RBP	3.21	□□□□□ -1.9
TSR4	YOL022C	YML002W	P0CF17	737 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	PEP5	P12868	1029 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	RPS2	P25443	254 aa	Known RBP	3.2	□□□□□ -1.9
TSR4	YOL022C	RAD14	P28519	371 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	YIM1	P28625	365 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	AFG1	P32317	509 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	MSN2	P33748	704 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	BNA4	P38169	460 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	TCM62	P38228	572 aa	Known RBP	3.2	□□□□□ -1.9
TSR4	YOL022C	ERG7	P38604	731 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
TSR4	YOL022C	YGR149W	P48236	432 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	YVH1	Q02256	364 aa	Known RBP	3.2	□□□□□ -1.9
TSR4	YOL022C	YPL014W	Q02606	381 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	SHR3	Q02774	210 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	GYL1	Q04322	720 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	SIL1	Q08199	421 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	RRD2	Q12461	358 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	PAR32	Q12515	295 aa	Known RBP	3.2	□□□□□ -1.9
TSR4	YOL022C	CSR2	Q12734	1121 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	YBR298C-A	Q8TGK4	73 aa		3.2	□□□□□ -1.9
TSR4	YOL022C	SPS4	P09937	338 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	MRS3	P10566	314 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	NAT1	P12945	854 aa	Known RBP	3.19	□□□□□ -1.9
TSR4	YOL022C	SNC1	P31109	117 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	MDL1	P33310	695 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	MIC60	P36112	540 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	PIM1	P36775	1133 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	DUG2	P38149	878 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	RRT2	P38332	387 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	LCB2	P40970	561 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	YJR154W	P47181	346 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	FMS1	P50264	508 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	ZPR1	P53303	486 aa	Known RBP	3.19	□□□□□ -1.9
TSR4	YOL022C	RHO4	Q00246	291 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	TIP41	Q12199	356 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	GPM3	Q12326	303 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	RAV1	P47104	1357 aa		3.19	□□□□□ -1.9
TSR4	YOL022C	SUC2	P00724	532 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	RHO2	P06781	192 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	RRP7	P25368	297 aa	Predicted RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	DPH2	P32461	534 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	ERG1	P32476	496 aa	Known RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	LOS1	P33418	1100 aa	Predicted RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	RXT2	P38255	430 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	NTC20	P38302	140 aa	Predicted RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	DHH1	P39517	506 aa	Known RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	GDI1	P39958	451 aa	Known RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	URB2	P47108	1174 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	COS5	P47187	383 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	YGL138C	P53122	345 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	IMP4	P53941	290 aa	Known RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	KTR5	P53966	522 aa	Predicted RBP	3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms