RNA–Protein interactions for RNA: YNL321W

VNX1, Transcript of Calcium/H+ antiporter localized to the endoplasmic reticulum membrane, yeast

Gene VNX1, Length 2,727 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VNX1	YNL321W	ATP25	Q03153	612 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	HMO1	Q03973	246 aa	Known RBP	5.7	□□□□□ -1.5
VNX1	YNL321W	SEC10	Q06245	871 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	EMG1	Q06287	252 aa	Known RBP	5.7	□□□□□ -1.5
VNX1	YNL321W	YRM1	Q12340	786 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	LPX1	Q12405	387 aa	Known RBP	5.7	□□□□□ -1.5
VNX1	YNL321W	DAP2	P18962	818 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	YSP3	P25036	478 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	RAD14	P28519	371 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	GCD11	P32481	527 aa	Known RBP	5.7	□□□□□ -1.5
VNX1	YNL321W	YUH1	P35127	236 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	CTF13	P35203	478 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	PSD1	P39006	500 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	UTP18	P40362	594 aa	Predicted RBP	5.7	□□□□□ -1.5
VNX1	YNL321W	EFM5	P53200	248 aa	Known RBP	5.7	□□□□□ -1.5
VNX1	YNL321W	NUP100	Q02629	959 aa		5.7	□□□□□ -1.5
VNX1	YNL321W	NMT1	P14743	455 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	YCR090C	P25654	182 aa	Known RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	SGE1	P33335	543 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	YKL107W	P34251	309 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	MRPL40	P36534	297 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	YBR259W	P38338	688 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	URA8	P38627	578 aa	Predicted RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	MPH1	P40562	993 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	TRF5	P48561	642 aa	Known RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	YTP1	P53584	459 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	NHP10	Q03435	203 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	CAR1	P00812	333 aa	Known RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	CAD1	P24813	409 aa	Known RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	EMC1	P25574	760 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	AEP1	P32493	518 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	TYE7	P33122	291 aa	Predicted RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	LOT5	P34234	306 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	ECM4	P36156	370 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	STB5	P38699	743 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	RGI2	P40188	164 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	YIL001W	P40560	513 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	IPI3	P53877	555 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	REG1	Q00816	1014 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	OSH6	Q02201	448 aa		5.69	□□□□□ -1.5
VNX1	YNL321W	ELP4	Q02884	456 aa	Known RBP	5.69	□□□□□ -1.5
VNX1	YNL321W	ERG20	P08524	352 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	ABF1	P14164	731 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	SAF1	P38352	637 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	ARN1	P38731	627 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	SEC31	P38968	1273 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	JHD1	P40034	492 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	YIL077C	P40508	320 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	ARF3	P40994	183 aa	RIP-Chip data	5.68	□□□□□ -1.5	not detected
VNX1	YNL321W	DIM1	P41819	318 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	HXT16	P47185	567 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	CUS2	P53830	285 aa	Predicted RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	RTN1	Q04947	295 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	BCP1	Q06338	283 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	ENT4	Q07872	247 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	IOC2	Q12072	812 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	APC9	Q12107	265 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	RMD5	Q12508	421 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	YPR089W	O13585	888 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	SUI3	P09064	285 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	HOM2	P13663	365 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	MET22	P32179	357 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	PYC2	P32327	1180 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	HXT4	P32467	576 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	IMP3	P32899	183 aa	Predicted RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	VRP1	P37370	817 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	EOS1	P53938	366 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	YPL014W	Q02606	381 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	ISU1	Q03020	165 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	BSP1	Q06604	576 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	MCH5	Q08777	521 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	HEM2	P05373	342 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	CAR2	P07991	424 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	SEC15	P22224	910 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	BUD14	P27637	709 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	UBP7	P40453	1071 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	QDR2	P40474	542 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	GCN20	P43535	752 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	BOL2	P53082	120 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	DUO1	P53168	247 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	COS6	P53344	381 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	RNY1	Q02933	434 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	RPN9	Q04062	393 aa	Known RBP	5.68	□□□□□ -1.5
VNX1	YNL321W	YPR202W	Q08993	238 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	TAF3	Q12297	353 aa		5.68	□□□□□ -1.5
VNX1	YNL321W	GCN4	P03069	281 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	MRPL8	P22353	238 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	DGR2	P32330	852 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	STB6	P36085	766 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	MUP3	P38734	546 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	UTP9	P38882	575 aa	Known RBP	5.67	□□□□□ -1.5
VNX1	YNL321W	SHU2	P38957	223 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	ATF1	P40353	525 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	SAP4	P53036	818 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	NOP19	P53317	196 aa	Predicted RBP	5.67	□□□□□ -1.5
VNX1	YNL321W	TRM112	P53738	135 aa	Predicted RBP	5.67	□□□□□ -1.5
VNX1	YNL321W	PEX13	P80667	386 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	MSC3	Q05812	728 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	YLR413W	Q06689	675 aa		5.67	□□□□□ -1.5
VNX1	YNL321W	PRC1	P00729	532 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms