RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C MRP13P12686 339 aa0.53□□□□□ -2.32
NIP1YMR309C SAM2P19358 384 aaKnown RBP0.53□□□□□ -2.32
NIP1YMR309C YIM1P28625 365 aa0.53□□□□□ -2.32
NIP1YMR309C SYN8P31377 255 aa0.53□□□□□ -2.32
NIP1YMR309C UTH1P36135 365 aa0.53□□□□□ -2.32
NIP1YMR309C FAU1P40099 211 aa0.53□□□□□ -2.32
NIP1YMR309C LYS14P40971 790 aa0.53□□□□□ -2.32
NIP1YMR309C BNA1P47096 177 aa0.53□□□□□ -2.32
NIP1YMR309C AVT4P50944 713 aa0.53□□□□□ -2.32
NIP1YMR309C TOF2Q02208 771 aa0.53□□□□□ -2.32
NIP1YMR309C YMR027WQ04371 470 aa0.53□□□□□ -2.32
NIP1YMR309C RBS1Q05672 457 aaKnown RBP0.53□□□□□ -2.32
NIP1YMR309C HRI1Q05905 244 aaKnown RBP0.53□□□□□ -2.32
NIP1YMR309C BNA5Q05979 453 aa0.53□□□□□ -2.32
NIP1YMR309C CFT2Q12102 859 aaPredicted RBP0.53□□□□□ -2.32
NIP1YMR309C TMS1Q12116 473 aa0.53□□□□□ -2.32
NIP1YMR309C YBR126W-AQ8TGU7 68 aa0.53□□□□□ -2.32
NIP1YMR309C BRR1Q99177 341 aaPredicted RBP0.53□□□□□ -2.32
NIP1YMR309C YOL087CQ99247 1116 aa0.53□□□□□ -2.32
NIP1YMR309C CHS1P08004 1131 aa0.53□□□□□ -2.33
NIP1YMR309C GLK1P17709 500 aaKnown RBP0.53□□□□□ -2.33
NIP1YMR309C PCL1P24867 279 aa0.53□□□□□ -2.33
NIP1YMR309C PEP3P27801 918 aa0.53□□□□□ -2.33
NIP1YMR309C GLC7P32598 312 aaKnown RBP0.53□□□□□ -2.33
NIP1YMR309C HCS1P34243 683 aa0.53□□□□□ -2.33
NIP1YMR309C RRN3P36070 627 aa0.53□□□□□ -2.33
NIP1YMR309C MRPL10P36520 322 aa0.53□□□□□ -2.33
NIP1YMR309C PIM1P36775 1133 aa0.53□□□□□ -2.33
NIP1YMR309C DUG2P38149 878 aa0.53□□□□□ -2.33
NIP1YMR309C REG2P38232 338 aa0.53□□□□□ -2.33
NIP1YMR309C TIF4631P39935 952 aaKnown RBP0.53□□□□□ -2.33
NIP1YMR309C ISC1P40015 477 aaKnown RBP0.53□□□□□ -2.33
NIP1YMR309C CAF130P53280 1122 aaPredicted RBP0.53□□□□□ -2.33
NIP1YMR309C MDG1P53885 366 aa0.53□□□□□ -2.33
NIP1YMR309C IBD2P53892 351 aa0.53□□□□□ -2.33
NIP1YMR309C HAL1Q01766 294 aa0.53□□□□□ -2.33
NIP1YMR309C YSA1Q01976 231 aa0.53□□□□□ -2.33
NIP1YMR309C RNY1Q02933 434 aaKnown RBP0.53□□□□□ -2.33
NIP1YMR309C ATG16Q03818 150 aa0.53□□□□□ -2.33
NIP1YMR309C TFC6Q06339 672 aa0.53□□□□□ -2.33
NIP1YMR309C RTT109Q07794 436 aa0.53□□□□□ -2.33
NIP1YMR309C SSP2Q08646 371 aa0.53□□□□□ -2.33
NIP1YMR309C YOR365CQ08844 703 aa0.53□□□□□ -2.33
NIP1YMR309C RBD2Q12270 262 aa0.53□□□□□ -2.33
NIP1YMR309C ERV2Q12284 196 aa0.53□□□□□ -2.33
NIP1YMR309C WTM1Q12363 437 aaKnown RBP0.53□□□□□ -2.33
NIP1YMR309C YML133CQ03099 1374 aa0.52□□□□□ -2.33
NIP1YMR309C YLL067CQ07888 1374 aa0.52□□□□□ -2.33
NIP1YMR309C YLL066CQ99208 1374 aa0.52□□□□□ -2.33
NIP1YMR309C LEU4P06208 619 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C COR1P07256 457 aa0.52□□□□□ -2.33
NIP1YMR309C HSC82P15108 705 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C YCK1P23291 538 aa0.52□□□□□ -2.33
NIP1YMR309C YCR100CP25606 316 aa0.52□□□□□ -2.33
NIP1YMR309C STB6P36085 766 aa0.52□□□□□ -2.33
NIP1YMR309C RIB5P38145 238 aa0.52□□□□□ -2.33
NIP1YMR309C TCM62P38228 572 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C MSR1P38714 643 aa0.52□□□□□ -2.33
NIP1YMR309C TMA108P40462 946 aa0.52□□□□□ -2.33
NIP1YMR309C DPH1P40487 425 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C OST1P41543 476 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C LAM5P43560 674 aa0.52□□□□□ -2.33
NIP1YMR309C APT1P49435 187 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C OGG1P53397 376 aaPredicted RBP0.52□□□□□ -2.33
NIP1YMR309C MSC1Q03104 513 aa0.52□□□□□ -2.33
NIP1YMR309C MRPL35Q06678 367 aa0.52□□□□□ -2.33
NIP1YMR309C ADH2P00331 348 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C SUC2P00724 532 aa0.52□□□□□ -2.33
NIP1YMR309C TOP1P04786 769 aa0.52□□□□□ -2.33
NIP1YMR309C SPS22P25380 463 aa0.52□□□□□ -2.33
NIP1YMR309C BUB3P26449 341 aa0.52□□□□□ -2.33
NIP1YMR309C CHS3P29465 1165 aa0.52□□□□□ -2.33
NIP1YMR309C REC114P32841 428 aa0.52□□□□□ -2.33
NIP1YMR309C MNS1P32906 549 aa0.52□□□□□ -2.33
NIP1YMR309C YCR041WP37265 110 aa0.52□□□□□ -2.33
NIP1YMR309C ERP2P39704 215 aa0.52□□□□□ -2.33
NIP1YMR309C PRM5P40476 318 aa0.52□□□□□ -2.33
NIP1YMR309C YJR008WP47085 338 aa0.52□□□□□ -2.33
NIP1YMR309C URB2P47108 1174 aa0.52□□□□□ -2.33
NIP1YMR309C IMD4P50094 524 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C HEF3P53978 1044 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C HER2Q03557 464 aa0.52□□□□□ -2.33
NIP1YMR309C COQ9Q05779 260 aa0.52□□□□□ -2.33
NIP1YMR309C NOP58Q12499 511 aaKnown RBP0.52□□□□□ -2.33
NIP1YMR309C SEC53P07283 254 aaKnown RBP0.51□□□□□ -2.33
NIP1YMR309C NAM2P11325 894 aa0.51□□□□□ -2.33
NIP1YMR309C RNA14P25298 677 aaKnown RBP0.51□□□□□ -2.33
NIP1YMR309C CDC60P26637 1090 aaKnown RBP0.51□□□□□ -2.33
NIP1YMR309C MFT1P33441 392 aaKnown RBP0.51□□□□□ -2.33
NIP1YMR309C MID2P36027 376 aa0.51□□□□□ -2.33
NIP1YMR309C MBB1P39534 108 aa0.51□□□□□ -2.33
NIP1YMR309C TPM2P40414 161 aa0.51□□□□□ -2.33
NIP1YMR309C PAN6P40459 309 aa0.51□□□□□ -2.33
NIP1YMR309C REE1P40893 198 aa0.51□□□□□ -2.33
NIP1YMR309C SIP4P46954 829 aa0.51□□□□□ -2.33
NIP1YMR309C AIM22P47051 409 aa0.51□□□□□ -2.33
NIP1YMR309C SSN8P47821 323 aa0.51□□□□□ -2.33
NIP1YMR309C OCA1P50946 238 aaPredicted RBP0.51□□□□□ -2.33
NIP1YMR309C DUO1P53168 247 aaKnown RBP0.51□□□□□ -2.33
NIP1YMR309C ART5P53244 586 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms