RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W ADK2P26364 225 aa3.32□□□□□ -1.88
UBP8YMR223W RME1P32338 300 aaKnown RBP3.32□□□□□ -1.88
UBP8YMR223W MTC4P38335 694 aaKnown RBP3.32□□□□□ -1.88
UBP8YMR223W DIA4P38705 446 aaPredicted RBP3.32□□□□□ -1.88
UBP8YMR223W CTM1P38818 585 aa3.32□□□□□ -1.88
UBP8YMR223W YHR131CP38835 850 aa3.32□□□□□ -1.88
UBP8YMR223W UME6P39001 836 aa3.32□□□□□ -1.88
UBP8YMR223W CSM2P40465 213 aa3.32□□□□□ -1.88
UBP8YMR223W AIP1P46680 615 aaKnown RBP3.32□□□□□ -1.88
UBP8YMR223W PYK2P52489 506 aaKnown RBP3.32□□□□□ -1.88
UBP8YMR223W YNR061CP53747 219 aa3.32□□□□□ -1.88
UBP8YMR223W OAZ1Q02803 292 aa3.32□□□□□ -1.88
UBP8YMR223W RMT2Q03305 412 aa3.32□□□□□ -1.88
UBP8YMR223W CWC21Q03375 135 aaKnown RBP3.32□□□□□ -1.88
UBP8YMR223W YMR160WQ03823 816 aa3.32□□□□□ -1.88
UBP8YMR223W GYL1Q04322 720 aa3.32□□□□□ -1.88
UBP8YMR223W TAP42Q04372 366 aa3.32□□□□□ -1.88
UBP8YMR223W DBP9Q06218 594 aaKnown RBP3.32□□□□□ -1.88
UBP8YMR223W RTN2Q12443 393 aa3.32□□□□□ -1.88
UBP8YMR223W ARG81P05085 880 aa3.31□□□□□ -1.88
UBP8YMR223W ATR1P13090 542 aa3.31□□□□□ -1.88
UBP8YMR223W ARC19P33204 171 aaKnown RBP3.31□□□□□ -1.88
UBP8YMR223W SIF2P38262 535 aa3.31□□□□□ -1.88
UBP8YMR223W OTU2P38747 307 aaKnown RBP3.31□□□□□ -1.88
UBP8YMR223W YER034WP40022 185 aaKnown RBP3.31□□□□□ -1.88
UBP8YMR223W OSW5P40219 148 aa3.31□□□□□ -1.88
UBP8YMR223W ZIM17P42844 174 aa3.31□□□□□ -1.88
UBP8YMR223W LAM5P43560 674 aa3.31□□□□□ -1.88
UBP8YMR223W VPS4P52917 437 aa3.31□□□□□ -1.88
UBP8YMR223W YGR266WP53326 701 aa3.31□□□□□ -1.88
UBP8YMR223W PRO2P54885 456 aaKnown RBP3.31□□□□□ -1.88
UBP8YMR223W NUS1Q12063 375 aa3.31□□□□□ -1.88
UBP8YMR223W PCD1Q12524 340 aa3.31□□□□□ -1.88
UBP8YMR223W YOL159C-AQ3E769 90 aa3.31□□□□□ -1.88
UBP8YMR223W PUP2P32379 260 aa3.3□□□□□ -1.88
UBP8YMR223W HXT1P32465 570 aa3.3□□□□□ -1.88
UBP8YMR223W TEF4P36008 412 aaKnown RBP3.3□□□□□ -1.88
UBP8YMR223W UIP5P36137 443 aa3.3□□□□□ -1.88
UBP8YMR223W PCH2P38126 564 aa3.3□□□□□ -1.88
UBP8YMR223W ROT2P38138 954 aa3.3□□□□□ -1.88
UBP8YMR223W SPO22P40511 975 aa3.3□□□□□ -1.88
UBP8YMR223W EFM4P40516 257 aa3.3□□□□□ -1.88
UBP8YMR223W DSD1P53095 428 aa3.3□□□□□ -1.88
UBP8YMR223W ART5P53244 586 aaKnown RBP3.3□□□□□ -1.88
UBP8YMR223W YVH1Q02256 364 aaKnown RBP3.3□□□□□ -1.88
UBP8YMR223W INA17Q02888 182 aa3.3□□□□□ -1.88
UBP8YMR223W RRN5Q02983 363 aa3.3□□□□□ -1.88
UBP8YMR223W EMI2Q04409 500 aaKnown RBP3.3□□□□□ -1.88
UBP8YMR223W DIC1Q06143 298 aa3.3□□□□□ -1.88
UBP8YMR223W RUD3Q12234 484 aaKnown RBP3.3□□□□□ -1.88
UBP8YMR223W PSY3Q12318 242 aa3.3□□□□□ -1.88
UBP8YMR223W YOR019WQ99248 730 aa3.3□□□□□ -1.88
UBP8YMR223W YBR085C-AO43137 85 aa3.29□□□□□ -1.88
UBP8YMR223W ERG8P24521 451 aa3.29□□□□□ -1.88
UBP8YMR223W YEL045CP32616 141 aa3.29□□□□□ -1.88
UBP8YMR223W STB6P36085 766 aa3.29□□□□□ -1.88
UBP8YMR223W TSC10P38342 320 aa3.29□□□□□ -1.88
UBP8YMR223W ANS1P38832 159 aa3.29□□□□□ -1.88
UBP8YMR223W PSD1P39006 500 aa3.29□□□□□ -1.88
UBP8YMR223W IME4P41833 600 aa3.29□□□□□ -1.88
UBP8YMR223W DUO1P53168 247 aaKnown RBP3.29□□□□□ -1.88
UBP8YMR223W LSB1P53281 241 aa3.29□□□□□ -1.88
UBP8YMR223W TOF1P53840 1238 aa3.29□□□□□ -1.88
UBP8YMR223W VPS9P54787 451 aa3.29□□□□□ -1.88
UBP8YMR223W CIK1Q01649 594 aa3.29□□□□□ -1.88
UBP8YMR223W ADA2Q02336 434 aa3.29□□□□□ -1.88
UBP8YMR223W YMR087WQ04299 284 aa3.29□□□□□ -1.88
UBP8YMR223W ATG38Q05789 226 aaKnown RBP3.29□□□□□ -1.88
UBP8YMR223W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
UBP8YMR223W PML1Q07930 204 aaPredicted RBP3.29□□□□□ -1.88
UBP8YMR223W ETT1Q08421 412 aaKnown RBP3.29□□□□□ -1.88
UBP8YMR223W MDY2Q12285 212 aa3.29□□□□□ -1.88
UBP8YMR223W SFI1Q12369 946 aa3.29□□□□□ -1.88
UBP8YMR223W HEM2P05373 342 aa3.28□□□□□ -1.88
UBP8YMR223W KAR3P17119 729 aa3.28□□□□□ -1.88
UBP8YMR223W DBP3P20447 523 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W NIP1P32497 812 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W GYP6P32806 458 aa3.28□□□□□ -1.88
UBP8YMR223W SUR1P33300 382 aa3.28□□□□□ -1.88
UBP8YMR223W ADH5P38113 351 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W DBP8P38719 431 aa3.28□□□□□ -1.88
UBP8YMR223W ARF3P40994 183 aaRIP-Chip data3.28□□□□□ -1.88not detected
UBP8YMR223W EPL1P43572 832 aa3.28□□□□□ -1.88
UBP8YMR223W MRX6P48564 524 aa3.28□□□□□ -1.88
UBP8YMR223W LYS4P49367 693 aaPredicted RBP3.28□□□□□ -1.88
UBP8YMR223W NUP84P52891 726 aa3.28□□□□□ -1.88
UBP8YMR223W VPS75P53853 264 aa3.28□□□□□ -1.88
UBP8YMR223W REX2P54964 269 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W RHO4Q00246 291 aa3.28□□□□□ -1.88
UBP8YMR223W RPT6Q01939 405 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W TOF2Q02208 771 aa3.28□□□□□ -1.88
UBP8YMR223W ERB1Q04660 807 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W PAL1Q05518 499 aaKnown RBP3.28□□□□□ -1.88
UBP8YMR223W GLO2Q05584 274 aa3.28□□□□□ -1.88
UBP8YMR223W YLR456WQ06199 204 aa3.28□□□□□ -1.88
UBP8YMR223W YCL021W-AQ96VH3 125 aa3.28□□□□□ -1.88
UBP8YMR223W GCN4P03069 281 aa3.27□□□□□ -1.89
UBP8YMR223W RPL5P26321 297 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W COY1P34237 679 aa3.27□□□□□ -1.89
UBP8YMR223W PMU1P36069 295 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms