RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W YOL087CQ99247 1116 aa14.66□□□□□ -0.06
SCJ1YMR214W PRP6P19735 899 aaPredicted RBP14.65□□□□□ -0.06
SCJ1YMR214W SEC62P21825 274 aa14.65□□□□□ -0.06
SCJ1YMR214W FMP46P36141 133 aaKnown RBP14.65□□□□□ -0.06
SCJ1YMR214W MRPL15P36523 253 aa14.65□□□□□ -0.06
SCJ1YMR214W SOL2P37262 315 aa14.65□□□□□ -0.06
SCJ1YMR214W UBA4P38820 440 aa14.65□□□□□ -0.06
SCJ1YMR214W BEM4P39011 633 aa14.65□□□□□ -0.06
SCJ1YMR214W NPT1P39683 429 aaKnown RBP14.65□□□□□ -0.06
SCJ1YMR214W MEP1P40260 492 aa14.65□□□□□ -0.06
SCJ1YMR214W GTR2P53290 341 aa14.65□□□□□ -0.06
SCJ1YMR214W YET2Q04210 160 aa14.65□□□□□ -0.06
SCJ1YMR214W HSP42Q12329 375 aa14.65□□□□□ -0.06
SCJ1YMR214W UTP20P35194 2493 aaKnown RBP14.64□□□□□ -0.07
SCJ1YMR214W TRP3P00937 484 aa14.64□□□□□ -0.07
SCJ1YMR214W BUB2P26448 306 aaPredicted RBP14.64□□□□□ -0.07
SCJ1YMR214W PDB1P32473 366 aaKnown RBP14.64□□□□□ -0.07
SCJ1YMR214W YPT52P36018 234 aaKnown RBP14.64□□□□□ -0.07
SCJ1YMR214W FTH1P38310 465 aa14.64□□□□□ -0.07
SCJ1YMR214W YHR210CP38893 341 aa14.64□□□□□ -0.07
SCJ1YMR214W FKH2P41813 862 aa14.64□□□□□ -0.07
SCJ1YMR214W YNL010WP53981 241 aaKnown RBP14.64□□□□□ -0.07
SCJ1YMR214W YLR049CQ12110 428 aa14.64□□□□□ -0.07
SCJ1YMR214W LEU9Q12166 604 aaKnown RBP14.64□□□□□ -0.07
SCJ1YMR214W CAR1P00812 333 aaKnown RBP14.63□□□□□ -0.07
SCJ1YMR214W SWI5P08153 709 aa14.63□□□□□ -0.07
SCJ1YMR214W SFC1P33303 322 aa14.63□□□□□ -0.07
SCJ1YMR214W SDH3P33421 198 aa14.63□□□□□ -0.07
SCJ1YMR214W SEC27P41811 889 aaKnown RBP14.63□□□□□ -0.07
SCJ1YMR214W NOP19P53317 196 aaPredicted RBP14.63□□□□□ -0.07
SCJ1YMR214W PRO2P54885 456 aaKnown RBP14.63□□□□□ -0.07
SCJ1YMR214W REX2P54964 269 aaKnown RBP14.63□□□□□ -0.07
SCJ1YMR214W GTR1Q00582 310 aa14.63□□□□□ -0.07
SCJ1YMR214W SPC24Q04477 213 aa14.63□□□□□ -0.07
SCJ1YMR214W BCH1Q05029 724 aa14.63□□□□□ -0.07
SCJ1YMR214W YEH2Q07950 538 aa14.63□□□□□ -0.07
SCJ1YMR214W CDC9P04819 755 aa14.62□□□□□ -0.07
SCJ1YMR214W SPT3P06844 337 aa14.62□□□□□ -0.07
SCJ1YMR214W HOP09932 586 aa14.62□□□□□ -0.07
SCJ1YMR214W COS2P0CX12 379 aa14.62□□□□□ -0.07
SCJ1YMR214W COS3P0CX13 379 aa14.62□□□□□ -0.07
SCJ1YMR214W MET8P15807 274 aa14.62□□□□□ -0.07
SCJ1YMR214W SCS2P40075 244 aaKnown RBP14.62□□□□□ -0.07
SCJ1YMR214W COS4P43542 379 aa14.62□□□□□ -0.07
SCJ1YMR214W YJL049WP47048 450 aa14.62□□□□□ -0.07
SCJ1YMR214W CYT1P07143 309 aa14.61□□□□□ -0.07
SCJ1YMR214W FUR1P18562 216 aaKnown RBP14.61□□□□□ -0.07
SCJ1YMR214W YCK2P23292 546 aaKnown RBP14.61□□□□□ -0.07
SCJ1YMR214W EMP65P40085 556 aa14.61□□□□□ -0.07
SCJ1YMR214W NNF2P53253 936 aa14.61□□□□□ -0.07
SCJ1YMR214W LGE1Q02796 332 aaKnown RBP14.61□□□□□ -0.07
SCJ1YMR214W PNO1Q99216 274 aaKnown RBP14.61□□□□□ -0.07
SCJ1YMR214W RPL7AP05737 244 aaKnown RBP14.6□□□□□ -0.07
SCJ1YMR214W CMP2P14747 604 aa14.6□□□□□ -0.07
SCJ1YMR214W MEI5P32489 222 aa14.6□□□□□ -0.07
SCJ1YMR214W YKL100CP34248 587 aa14.6□□□□□ -0.07
SCJ1YMR214W CUE2P36075 443 aaKnown RBP14.6□□□□□ -0.07
SCJ1YMR214W FRT2P39734 528 aa14.6□□□□□ -0.07
SCJ1YMR214W PFA3P42836 336 aa14.6□□□□□ -0.07
SCJ1YMR214W YPT32P51996 222 aaKnown RBP14.6□□□□□ -0.07
SCJ1YMR214W CTK1Q03957 528 aaKnown RBP14.6□□□□□ -0.07
SCJ1YMR214W GTB1Q04924 702 aa14.6□□□□□ -0.07
SCJ1YMR214W RPL7BQ12213 244 aaKnown RBP14.6□□□□□ -0.07
SCJ1YMR214W ATG34Q12292 412 aa14.6□□□□□ -0.07
SCJ1YMR214W LAT1P12695 482 aaKnown RBP14.59□□□□□ -0.07
SCJ1YMR214W CLN2P20438 545 aa14.59□□□□□ -0.07
SCJ1YMR214W CRM1P30822 1084 aaKnown RBP14.59□□□□□ -0.07
SCJ1YMR214W RPS1AP33442 255 aaKnown RBP14.59□□□□□ -0.07
SCJ1YMR214W YBL029WP38201 376 aa14.59□□□□□ -0.07
SCJ1YMR214W TSC10P38342 320 aa14.59□□□□□ -0.07
SCJ1YMR214W ARN1P38731 627 aa14.59□□□□□ -0.07
SCJ1YMR214W ARB1P40024 610 aaKnown RBP14.59□□□□□ -0.07
SCJ1YMR214W MET18P40469 1032 aa14.59□□□□□ -0.07
SCJ1YMR214W RAD34Q06665 692 aa14.59□□□□□ -0.07
SCJ1YMR214W FMP45Q07651 309 aa14.59□□□□□ -0.07
SCJ1YMR214W SLF1Q12034 447 aaKnown RBP14.59□□□□□ -0.07
SCJ1YMR214W HUA2Q12134 243 aa14.59□□□□□ -0.07
SCJ1YMR214W RNA1P11745 407 aaKnown RBP14.58□□□□□ -0.08
SCJ1YMR214W PRI2P20457 528 aa14.58□□□□□ -0.08
SCJ1YMR214W GIC1P38785 314 aa14.58□□□□□ -0.08
SCJ1YMR214W PLB1P39105 664 aa14.58□□□□□ -0.08
SCJ1YMR214W SPF1P39986 1215 aaKnown RBP14.58□□□□□ -0.08
SCJ1YMR214W GCD10P41814 478 aa14.58□□□□□ -0.08
SCJ1YMR214W GCV1P48015 400 aa14.58□□□□□ -0.08
SCJ1YMR214W SGF73P53165 657 aa14.58□□□□□ -0.08
SCJ1YMR214W YPR202WQ08993 238 aa14.58□□□□□ -0.08
SCJ1YMR214W YDR056CQ12025 205 aa14.58□□□□□ -0.08
SCJ1YMR214W DBR1P24309 405 aaKnown RBP14.57□□□□□ -0.08
SCJ1YMR214W DGR2P32330 852 aa14.57□□□□□ -0.08
SCJ1YMR214W KAE1P36132 386 aa14.57□□□□□ -0.08
SCJ1YMR214W EHT1P38295 451 aa14.57□□□□□ -0.08
SCJ1YMR214W YIL086CP40503 102 aa14.57□□□□□ -0.08
SCJ1YMR214W YGR015CP53208 328 aa14.57□□□□□ -0.08
SCJ1YMR214W YMR111CQ04461 462 aaPredicted RBP14.57□□□□□ -0.08
SCJ1YMR214W GAD1Q04792 585 aa14.57□□□□□ -0.08
SCJ1YMR214W RSR1P13856 272 aa14.56□□□□□ -0.08
SCJ1YMR214W PWP1P21304 576 aaKnown RBP14.56□□□□□ -0.08
SCJ1YMR214W SSE1P32589 693 aaKnown RBP14.56□□□□□ -0.08
SCJ1YMR214W COX13P32799 129 aa14.56□□□□□ -0.08
SCJ1YMR214W CBF5P33322 483 aaKnown RBP RIP-Chip data14.56□□□□□ -0.08not detected
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms