RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W STB2P46679 850 aa4.79□□□□□ -1.64
ROT1YMR200W COS5P47187 383 aa4.79□□□□□ -1.64
ROT1YMR200W HOP2P53187 214 aa4.79□□□□□ -1.64
ROT1YMR200W YGR079WP53249 370 aa4.79□□□□□ -1.64
ROT1YMR200W COP1P53622 1201 aaKnown RBP4.79□□□□□ -1.64
ROT1YMR200W BOP2Q06150 570 aa4.79□□□□□ -1.64
ROT1YMR200W BCP1Q06338 283 aa4.79□□□□□ -1.64
ROT1YMR200W COS7Q07788 383 aa4.79□□□□□ -1.64
ROT1YMR200W BUG1Q12191 341 aa4.79□□□□□ -1.64
ROT1YMR200W MDM20Q12387 796 aaKnown RBP4.79□□□□□ -1.64
ROT1YMR200W PET18P25362 215 aa4.78□□□□□ -1.64
ROT1YMR200W ADH7P25377 361 aa4.78□□□□□ -1.64
ROT1YMR200W RDS1P25611 832 aa4.78□□□□□ -1.64
ROT1YMR200W RME1P32338 300 aaKnown RBP4.78□□□□□ -1.64
ROT1YMR200W CBF5P33322 483 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
ROT1YMR200W ZTA1P38230 334 aaKnown RBP4.78□□□□□ -1.64
ROT1YMR200W MSG5P38590 489 aa4.78□□□□□ -1.64
ROT1YMR200W LNP1P38878 278 aa4.78□□□□□ -1.64
ROT1YMR200W MIT1P40002 666 aa4.78□□□□□ -1.64
ROT1YMR200W GCD14P46959 383 aaPredicted RBP4.78□□□□□ -1.64
ROT1YMR200W NMD5P46970 1048 aa4.78□□□□□ -1.64
ROT1YMR200W MPS3P47069 682 aa4.78□□□□□ -1.64
ROT1YMR200W DIA3P52290 468 aa4.78□□□□□ -1.64
ROT1YMR200W HEF3P53978 1044 aaKnown RBP4.78□□□□□ -1.64
ROT1YMR200W SNZ1Q03148 297 aa4.78□□□□□ -1.64
ROT1YMR200W ARG7Q04728 441 aa4.78□□□□□ -1.64
ROT1YMR200W YLR455WQ06188 304 aa4.78□□□□□ -1.64
ROT1YMR200W ECM7Q06200 448 aa4.78□□□□□ -1.64
ROT1YMR200W YDL007C-AQ2V2Q0 85 aa4.78□□□□□ -1.64
ROT1YMR200W YBR255C-AQ3E776 120 aa4.78□□□□□ -1.64
ROT1YMR200W KGD1P20967 1014 aaKnown RBP4.77□□□□□ -1.65
ROT1YMR200W MSS1P32559 526 aaPredicted RBP4.77□□□□□ -1.65
ROT1YMR200W YBR144CP34215 104 aa4.77□□□□□ -1.65
ROT1YMR200W YKL070WP36087 169 aa4.77□□□□□ -1.65
ROT1YMR200W PIH1P38768 344 aa4.77□□□□□ -1.65
ROT1YMR200W PAC2P39937 518 aa4.77□□□□□ -1.65
ROT1YMR200W SWP82P43554 623 aa4.77□□□□□ -1.65
ROT1YMR200W YHC3P47040 408 aa4.77□□□□□ -1.65
ROT1YMR200W TRF5P48561 642 aaKnown RBP4.77□□□□□ -1.65
ROT1YMR200W YIP5P53108 310 aa4.77□□□□□ -1.65
ROT1YMR200W MPS2P53159 387 aa4.77□□□□□ -1.65
ROT1YMR200W DCS1Q06151 350 aa4.77□□□□□ -1.65
ROT1YMR200W YLR173WQ06247 608 aa4.77□□□□□ -1.65
ROT1YMR200W MRI1Q06489 411 aaKnown RBP4.77□□□□□ -1.65
ROT1YMR200W YDL086WQ07505 273 aa4.77□□□□□ -1.65
ROT1YMR200W MED2Q12124 431 aa4.77□□□□□ -1.65
ROT1YMR200W YOL107WQ12239 342 aa4.77□□□□□ -1.65
ROT1YMR200W SFG1Q12507 346 aa4.77□□□□□ -1.65
ROT1YMR200W YER175W-AQ8TGU4 54 aa4.77□□□□□ -1.65
ROT1YMR200W ARG81P05085 880 aa4.76□□□□□ -1.65
ROT1YMR200W ARG80P07249 177 aa4.76□□□□□ -1.65
ROT1YMR200W RSR1P13856 272 aa4.76□□□□□ -1.65
ROT1YMR200W RPL5P26321 297 aaKnown RBP4.76□□□□□ -1.65
ROT1YMR200W YIM1P28625 365 aa4.76□□□□□ -1.65
ROT1YMR200W GSH1P32477 678 aa4.76□□□□□ -1.65
ROT1YMR200W SUA5P32579 426 aa4.76□□□□□ -1.65
ROT1YMR200W YMC2P38087 329 aa4.76□□□□□ -1.65
ROT1YMR200W ARO9P38840 513 aaPredicted RBP4.76□□□□□ -1.65
ROT1YMR200W END3P39013 349 aa4.76□□□□□ -1.65
ROT1YMR200W AIM20P40451 204 aa4.76□□□□□ -1.65
ROT1YMR200W CIN1P40987 1014 aa4.76□□□□□ -1.65
ROT1YMR200W LOC1P43586 204 aaPredicted RBP4.76□□□□□ -1.65
ROT1YMR200W MRK1P50873 501 aa4.76□□□□□ -1.65
ROT1YMR200W MND1P53102 219 aa4.76□□□□□ -1.65
ROT1YMR200W YGL114WP53134 725 aa4.76□□□□□ -1.65
ROT1YMR200W NMA2P53204 395 aa4.76□□□□□ -1.65
ROT1YMR200W CAF130P53280 1122 aaPredicted RBP4.76□□□□□ -1.65
ROT1YMR200W EFM6P53970 246 aa4.76□□□□□ -1.65
ROT1YMR200W PNG1Q02890 363 aa4.76□□□□□ -1.65
ROT1YMR200W SMA2Q04658 369 aa4.76□□□□□ -1.65
ROT1YMR200W SSQ1Q05931 657 aaPredicted RBP4.76□□□□□ -1.65
ROT1YMR200W MED4Q12343 284 aa4.76□□□□□ -1.65
ROT1YMR200W AHC1Q12433 566 aa4.76□□□□□ -1.65
ROT1YMR200W CAR1P00812 333 aaKnown RBP4.75□□□□□ -1.65
ROT1YMR200W GPA1P08539 472 aa4.75□□□□□ -1.65
ROT1YMR200W SSA3P09435 649 aaKnown RBP4.75□□□□□ -1.65
ROT1YMR200W UGA1P17649 471 aa4.75□□□□□ -1.65
ROT1YMR200W ART10P18634 518 aaKnown RBP4.75□□□□□ -1.65
ROT1YMR200W SAG1P20840 650 aa4.75□□□□□ -1.65
ROT1YMR200W GEX1P25596 615 aa4.75□□□□□ -1.65
ROT1YMR200W MGM101P32787 269 aaKnown RBP4.75□□□□□ -1.65
ROT1YMR200W NTR2P36118 322 aaPredicted RBP4.75□□□□□ -1.65
ROT1YMR200W YBR139WP38109 508 aa4.75□□□□□ -1.65
ROT1YMR200W ARA1P38115 344 aa4.75□□□□□ -1.65
ROT1YMR200W CTP1P38152 299 aa4.75□□□□□ -1.65
ROT1YMR200W SDH8P38345 138 aa4.75□□□□□ -1.65
ROT1YMR200W SIP3P38717 1229 aa4.75□□□□□ -1.65
ROT1YMR200W VHS2P40463 436 aa4.75□□□□□ -1.65
ROT1YMR200W FAR3P46671 204 aa4.75□□□□□ -1.65
ROT1YMR200W GTO1P48239 356 aa4.75□□□□□ -1.65
ROT1YMR200W YGL185CP53100 379 aa4.75□□□□□ -1.65
ROT1YMR200W SPC98P53540 846 aa4.75□□□□□ -1.65
ROT1YMR200W MNT4P53745 580 aa4.75□□□□□ -1.65
ROT1YMR200W YNL134CP53912 376 aaKnown RBP4.75□□□□□ -1.65
ROT1YMR200W OSW1Q08692 278 aa4.75□□□□□ -1.65
ROT1YMR200W GIS3Q12418 502 aa4.75□□□□□ -1.65
ROT1YMR200W MTR10Q99189 972 aa4.75□□□□□ -1.65
ROT1YMR200W LAM4P38800 1345 aa4.74□□□□□ -1.65
ROT1YMR200W YPR089WO13585 888 aa4.74□□□□□ -1.65
ROT1YMR200W ABF1P14164 731 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms