RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C IRC6P43615 237 aa4.07□□□□□ -1.76
ATG16YMR159C URB2P47108 1174 aa4.07□□□□□ -1.76
ATG16YMR159C JJJ1P53863 590 aa4.07□□□□□ -1.76
ATG16YMR159C YDR239CQ03780 787 aa4.07□□□□□ -1.76
ATG16YMR159C CFT2Q12102 859 aaPredicted RBP4.07□□□□□ -1.76
ATG16YMR159C GDH1P07262 454 aaKnown RBP4.06□□□□□ -1.76
ATG16YMR159C PRP16P15938 1071 aaPredicted RBP4.06□□□□□ -1.76
ATG16YMR159C MCK1P21965 375 aaKnown RBP4.06□□□□□ -1.76
ATG16YMR159C ATS1P31386 333 aa4.06□□□□□ -1.76
ATG16YMR159C CMC1P36064 111 aa4.06□□□□□ -1.76
ATG16YMR159C VID24P38263 362 aa4.06□□□□□ -1.76
ATG16YMR159C SHO1P40073 367 aa4.06□□□□□ -1.76
ATG16YMR159C ESL1P40456 1118 aa4.06□□□□□ -1.76
ATG16YMR159C DOT5P40553 215 aa4.06□□□□□ -1.76
ATG16YMR159C CAF130P53280 1122 aaPredicted RBP4.06□□□□□ -1.76
ATG16YMR159C MRD1Q06106 887 aaKnown RBP4.06□□□□□ -1.76
ATG16YMR159C ATG29Q12092 213 aa4.06□□□□□ -1.76
ATG16YMR159C RAV1P47104 1357 aa4.05□□□□□ -1.76
ATG16YMR159C RPL20AP0CX23 172 aaKnown RBP4.05□□□□□ -1.76
ATG16YMR159C RPL20BP0CX24 172 aaPredicted RBP4.05□□□□□ -1.76
ATG16YMR159C YCR022CP25620 114 aa4.05□□□□□ -1.76
ATG16YMR159C PMU1P36069 295 aa4.05□□□□□ -1.76
ATG16YMR159C HAT2P39984 401 aa4.05□□□□□ -1.76
ATG16YMR159C ALG8P40351 577 aa4.05□□□□□ -1.76
ATG16YMR159C YJL132WP47014 750 aa4.05□□□□□ -1.76
ATG16YMR159C PDS5Q04264 1277 aa4.05□□□□□ -1.76
ATG16YMR159C TSR2Q06672 205 aaKnown RBP4.05□□□□□ -1.76
ATG16YMR159C CPR3P25719 182 aa4.04□□□□□ -1.76
ATG16YMR159C ATP11P32453 318 aa4.04□□□□□ -1.76
ATG16YMR159C RPN12P32496 274 aa4.04□□□□□ -1.76
ATG16YMR159C KRE9P39005 276 aa4.04□□□□□ -1.76
ATG16YMR159C ELP2P42935 788 aa4.04□□□□□ -1.76
ATG16YMR159C TAP42Q04372 366 aa4.04□□□□□ -1.76
ATG16YMR159C SCW10Q04951 389 aa4.04□□□□□ -1.76
ATG16YMR159C RQC1Q05468 723 aaKnown RBP4.04□□□□□ -1.76
ATG16YMR159C COG4Q06096 861 aa4.04□□□□□ -1.76
ATG16YMR159C GRX6Q12438 231 aa4.04□□□□□ -1.76
ATG16YMR159C LPD1P09624 499 aaKnown RBP4.03□□□□□ -1.76
ATG16YMR159C CKA1P15790 372 aa4.03□□□□□ -1.76
ATG16YMR159C YBP1P38315 674 aa4.03□□□□□ -1.76
ATG16YMR159C YHR218WP38899 603 aa4.03□□□□□ -1.76
ATG16YMR159C FAU1P40099 211 aa4.03□□□□□ -1.76
ATG16YMR159C YMR147WP40218 223 aaKnown RBP4.03□□□□□ -1.76
ATG16YMR159C IDP2P41939 412 aa4.03□□□□□ -1.76
ATG16YMR159C RIM20Q12033 661 aa4.03□□□□□ -1.76
ATG16YMR159C HEM2P05373 342 aa4.02□□□□□ -1.77
ATG16YMR159C PUT3P25502 979 aaPredicted RBP4.02□□□□□ -1.77
ATG16YMR159C BUB3P26449 341 aa4.02□□□□□ -1.77
ATG16YMR159C AGA1P32323 725 aa4.02□□□□□ -1.77
ATG16YMR159C GYP6P32806 458 aa4.02□□□□□ -1.77
ATG16YMR159C PMT1P33775 817 aa4.02□□□□□ -1.77
ATG16YMR159C TUL1P36096 758 aa4.02□□□□□ -1.77
ATG16YMR159C TIF5P38431 405 aaKnown RBP4.02□□□□□ -1.77
ATG16YMR159C NDE1P40215 560 aa4.02□□□□□ -1.77
ATG16YMR159C HXT14P42833 540 aa4.02□□□□□ -1.77
ATG16YMR159C GWT1P47026 490 aa4.02□□□□□ -1.77
ATG16YMR159C YGL108CP53139 140 aa4.02□□□□□ -1.77
ATG16YMR159C MRPL19P53875 158 aa4.02□□□□□ -1.77
ATG16YMR159C VPS72Q03388 795 aa4.02□□□□□ -1.77
ATG16YMR159C MES1P00958 751 aaKnown RBP4.01□□□□□ -1.77
ATG16YMR159C RHO2P06781 192 aa4.01□□□□□ -1.77
ATG16YMR159C GPI10P30777 616 aa4.01□□□□□ -1.77
ATG16YMR159C BOR1P53838 576 aa4.01□□□□□ -1.77
ATG16YMR159C RKM5Q12367 367 aa4.01□□□□□ -1.77
ATG16YMR159C CTF3Q12748 733 aa4.01□□□□□ -1.77
ATG16YMR159C CDC31P06704 161 aaKnown RBP4□□□□□ -1.77
ATG16YMR159C PMR1P13586 950 aa4□□□□□ -1.77
ATG16YMR159C ROX1P25042 368 aa4□□□□□ -1.77
ATG16YMR159C RAD14P28519 371 aa4□□□□□ -1.77
ATG16YMR159C KEL1P38853 1164 aaKnown RBP4□□□□□ -1.77
ATG16YMR159C SMF1P38925 575 aa4□□□□□ -1.77
ATG16YMR159C SYG1P40528 902 aa4□□□□□ -1.77
ATG16YMR159C POP1P41812 875 aa4□□□□□ -1.77
ATG16YMR159C OCA1P50946 238 aaPredicted RBP4□□□□□ -1.77
ATG16YMR159C OGG1P53397 376 aaPredicted RBP4□□□□□ -1.77
ATG16YMR159C SOV1Q04748 898 aa4□□□□□ -1.77
ATG16YMR159C TLG2Q08144 397 aa4□□□□□ -1.77
ATG16YMR159C MET17P06106 444 aa3.99□□□□□ -1.77
ATG16YMR159C LEU4P06208 619 aaKnown RBP3.99□□□□□ -1.77
ATG16YMR159C CBS2P14905 389 aa3.99□□□□□ -1.77
ATG16YMR159C RNA14P25298 677 aaKnown RBP3.99□□□□□ -1.77
ATG16YMR159C SPB1P25582 841 aaPredicted RBP3.99□□□□□ -1.77
ATG16YMR159C FUN19P28003 413 aaPredicted RBP3.99□□□□□ -1.77
ATG16YMR159C CBP4P37267 147 aa3.99□□□□□ -1.77
ATG16YMR159C OTU2P38747 307 aaKnown RBP3.99□□□□□ -1.77
ATG16YMR159C VMA13P41807 478 aaKnown RBP3.99□□□□□ -1.77
ATG16YMR159C MSO1P53604 210 aaKnown RBP3.99□□□□□ -1.77
ATG16YMR159C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
ATG16YMR159C CRM1P30822 1084 aaKnown RBP3.98□□□□□ -1.77
ATG16YMR159C NPL6P32832 435 aa3.98□□□□□ -1.77
ATG16YMR159C RSM22P36056 628 aa3.98□□□□□ -1.77
ATG16YMR159C GIR2Q03768 265 aaPredicted RBP3.98□□□□□ -1.77
ATG16YMR159C TAF11Q04226 346 aa3.98□□□□□ -1.77
ATG16YMR159C HNT3Q08702 217 aa3.98□□□□□ -1.77
ATG16YMR159C RRD2Q12461 358 aa3.98□□□□□ -1.77
ATG16YMR159C ATP10P18496 279 aa3.97□□□□□ -1.77
ATG16YMR159C FRE2P36033 711 aa3.97□□□□□ -1.77
ATG16YMR159C SRB7P47822 140 aa3.97□□□□□ -1.77
ATG16YMR159C YGR149WP48236 432 aa3.97□□□□□ -1.77
ATG16YMR159C RMD9P53140 646 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms