RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	MSC7	P38694	644 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	UBP9	P39967	754 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	YEL020C	P39994	560 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	ALG8	P40351	577 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	JHD2	P47156	728 aa	Predicted RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	ARO8	P53090	500 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	GTF1	P53260	183 aa	Predicted RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	LSB1	P53281	241 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	YPS7	Q06325	596 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	ENV7	Q12003	364 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	SED4	P25365	1065 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	CHA1	P25379	360 aa	Known RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	MGR1	P25573	417 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	GUT2	P32191	649 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	APE2	P32454	952 aa	Known RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	MSN4	P33749	630 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	SRY1	P36007	326 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	YNK1	P36010	153 aa	Known RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	FUI1	P38196	639 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	MLH1	P38920	769 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	MGS1	P40151	587 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	YIL054W	P40524	105 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	HXT14	P42833	540 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	RPE1	P46969	238 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	GAL83	Q04739	417 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	ADY4	Q05955	493 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	BOP2	Q06150	570 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	SSP2	Q08646	371 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	YOR283W	Q12040	230 aa	Known RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	PNS1	Q12412	539 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	DFG16	Q99234	619 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	STE2	D6VTK4	431 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	MIR1	P23641	311 aa	Known RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	CAP1	P28495	268 aa	Known RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	SRP102	P36057	244 aa	Predicted RBP	7.17	□□□□□ -1.26
AFG2	YLR397C	YKL133C	P36066	463 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	GPX2	P38143	162 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	QDR1	P40475	563 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	PKP1	P40530	394 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	TOS3	P43637	560 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	AIM23	P47015	356 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	ORC5	P50874	479 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	DOC1	P53068	250 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	YPR078C	Q06813	372 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	ZEO1	Q08245	113 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	YOL107W	Q12239	342 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	AGC1	Q12482	902 aa		7.17	□□□□□ -1.26
AFG2	YLR397C	PTC1	P35182	281 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	VHR1	P40522	640 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	SER2	P42941	309 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	SAD1	P43589	448 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	NBP1	P52919	319 aa	Predicted RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	OCA2	P53949	197 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	TRM82	Q03774	444 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	GAD1	Q04792	585 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	YOR238W	Q08634	303 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	SPE4	Q12455	300 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	YPR014C	Q6B0W2	109 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	TY1B-NL2	Q99337	1749 aa	Known RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	ENA1	P13587	1091 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	RPL3	P14126	387 aa	Known RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	HCM1	P25364	564 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	VPH1	P32563	840 aa	Known RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	PET10	P36139	283 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	MMS4	P38257	691 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	FAA2	P39518	744 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	UBP5	P39944	805 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	AVT2	P39981	480 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	DOT6	P40059	670 aa	Known RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	SLM1	P40485	686 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	CPR8	P53728	308 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	ENA2	Q01896	1091 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	MTG1	Q03151	367 aa	Predicted RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	EAR1	Q03212	550 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	SSL1	Q04673	461 aa	Predicted RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	UTP21	Q06078	939 aa	Predicted RBP	7.16	□□□□□ -1.26
AFG2	YLR397C	YET3	Q07451	203 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	ENA5	Q12691	1091 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	YLR422W	Q06409	1932 aa		7.16	□□□□□ -1.26
AFG2	YLR397C	YBR085C-A	O43137	85 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	FBP1	P09201	348 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	CAP2	P13517	287 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	DAL1	P32375	460 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	TSA1	P34760	196 aa	Known RBP	7.15	□□□□□ -1.26
AFG2	YLR397C	SSH1	P38353	490 aa	Known RBP	7.15	□□□□□ -1.26
AFG2	YLR397C	YHR182W	P38870	785 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	CIT3	P43635	486 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	FAR3	P46671	204 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	HXT16	P47185	567 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	MAK3	Q03503	176 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	HED1	Q03937	162 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	CIA1	Q05583	330 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	AKR2	Q12013	749 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	APC9	Q12107	265 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	HAT1	Q12341	374 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	RPN6	Q12377	434 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	YDL206W	Q12424	762 aa		7.15	□□□□□ -1.26
AFG2	YLR397C	PMA1	P05030	918 aa	Known RBP	7.15	□□□□□ -1.27
AFG2	YLR397C	TPK3	P05986	398 aa		7.15	□□□□□ -1.27
AFG2	YLR397C	GIT1	P25346	518 aa		7.15	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms