RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W ARX1Q03862 593 aaKnown RBP4.45□□□□□ -1.7
CBF5YLR175W YDR338CQ05497 695 aa4.45□□□□□ -1.7
CBF5YLR175W GLO2Q05584 274 aa4.45□□□□□ -1.7
CBF5YLR175W RIF2Q06208 395 aa4.45□□□□□ -1.7
CBF5YLR175W PLB3Q08108 686 aa4.45□□□□□ -1.7
CBF5YLR175W YPL225WQ08971 146 aaKnown RBP4.45□□□□□ -1.7
CBF5YLR175W TRM8Q12009 286 aa4.45□□□□□ -1.7
CBF5YLR175W SRO7Q12038 1033 aa4.45□□□□□ -1.7
CBF5YLR175W YLR049CQ12110 428 aa4.45□□□□□ -1.7
CBF5YLR175W RRP42Q12277 265 aaPredicted RBP4.45□□□□□ -1.7
CBF5YLR175W FUM1P08417 488 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W TUB1P09733 447 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W YCK2P23292 546 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W PHO91P27514 894 aa4.44□□□□□ -1.7
CBF5YLR175W MLS1P30952 554 aa4.44□□□□□ -1.7
CBF5YLR175W RML2P32611 393 aa4.44□□□□□ -1.7
CBF5YLR175W RMA1P36001 430 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W SOL2P37262 315 aa4.44□□□□□ -1.7
CBF5YLR175W FZO1P38297 855 aa4.44□□□□□ -1.7
CBF5YLR175W YEL073CP39974 107 aa4.44□□□□□ -1.7
CBF5YLR175W YJL070CP40361 888 aa4.44□□□□□ -1.7
CBF5YLR175W UTP18P40362 594 aaPredicted RBP4.44□□□□□ -1.7
CBF5YLR175W MET18P40469 1032 aa4.44□□□□□ -1.7
CBF5YLR175W NEO1P40527 1151 aa4.44□□□□□ -1.7
CBF5YLR175W VMA13P41807 478 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W FKH2P41813 862 aa4.44□□□□□ -1.7
CBF5YLR175W YJR154WP47181 346 aa4.44□□□□□ -1.7
CBF5YLR175W IMA1P53051 589 aa4.44□□□□□ -1.7
CBF5YLR175W MDM34P53083 459 aa4.44□□□□□ -1.7
CBF5YLR175W USE1P53146 245 aa4.44□□□□□ -1.7
CBF5YLR175W TYW3P53177 273 aa4.44□□□□□ -1.7
CBF5YLR175W YGR015CP53208 328 aa4.44□□□□□ -1.7
CBF5YLR175W NNF2P53253 936 aa4.44□□□□□ -1.7
CBF5YLR175W HAS1Q03532 505 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W EMI1Q04406 187 aa4.44□□□□□ -1.7
CBF5YLR175W YMR111CQ04461 462 aaPredicted RBP4.44□□□□□ -1.7
CBF5YLR175W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
CBF5YLR175W ESA1Q08649 445 aa4.44□□□□□ -1.7
CBF5YLR175W UAF30Q08747 228 aa4.44□□□□□ -1.7
CBF5YLR175W MCH5Q08777 521 aa4.44□□□□□ -1.7
CBF5YLR175W SNX3Q08826 162 aaKnown RBP4.44□□□□□ -1.7
CBF5YLR175W PST1Q12355 444 aa4.44□□□□□ -1.7
CBF5YLR175W NAG1Q8TGN9 163 aa4.44□□□□□ -1.7
CBF5YLR175W HSH49Q99181 213 aaPredicted RBP4.44□□□□□ -1.7
CBF5YLR175W MDM35O60200 86 aa4.43□□□□□ -1.7
CBF5YLR175W CDC21P06785 304 aa4.43□□□□□ -1.7
CBF5YLR175W SPT15P13393 240 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W CIN8P27895 1000 aa4.43□□□□□ -1.7
CBF5YLR175W CBF5P33322 483 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CBF5YLR175W TCD2P36101 447 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W CAF4P36130 643 aa4.43□□□□□ -1.7
CBF5YLR175W MRPL37P36532 105 aa4.43□□□□□ -1.7
CBF5YLR175W WSC4P38739 605 aa4.43□□□□□ -1.7
CBF5YLR175W YPT35P38815 214 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W BAT1P38891 393 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W AXL2P38928 823 aa4.43□□□□□ -1.7
CBF5YLR175W GIM4P40005 111 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W LSM5P40089 93 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W YJR149WP47177 404 aa4.43□□□□□ -1.7
CBF5YLR175W MTR3P48240 250 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W SOK2P53438 785 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W CAF120P53836 1060 aa4.43□□□□□ -1.7
CBF5YLR175W NAN1Q02931 896 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W YMR034CQ05131 434 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W FAR10Q06001 478 aa4.43□□□□□ -1.7
CBF5YLR175W RAD34Q06665 692 aa4.43□□□□□ -1.7
CBF5YLR175W CDA1Q06702 301 aa4.43□□□□□ -1.7
CBF5YLR175W PSR1Q07800 427 aa4.43□□□□□ -1.7
CBF5YLR175W YEH2Q07950 538 aa4.43□□□□□ -1.7
CBF5YLR175W OSW1Q08692 278 aa4.43□□□□□ -1.7
CBF5YLR175W YPR202WQ08993 238 aa4.43□□□□□ -1.7
CBF5YLR175W BRR1Q99177 341 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W SAS5Q99314 248 aa4.43□□□□□ -1.7
CBF5YLR175W TRP3P00937 484 aa4.43□□□□□ -1.7
CBF5YLR175W HXK2P04807 486 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W ARD1P07347 238 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W COS2P0CX12 379 aa4.43□□□□□ -1.7
CBF5YLR175W COS3P0CX13 379 aa4.43□□□□□ -1.7
CBF5YLR175W SCL1P21243 252 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W PWP1P21304 576 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W OCA4P25366 362 aa4.43□□□□□ -1.7
CBF5YLR175W AGP1P25376 633 aa4.43□□□□□ -1.7
CBF5YLR175W ATP11P32453 318 aa4.43□□□□□ -1.7
CBF5YLR175W LYP1P32487 611 aa4.43□□□□□ -1.7
CBF5YLR175W SSE1P32589 693 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W SDH3P33421 198 aa4.43□□□□□ -1.7
CBF5YLR175W SRX1P36077 127 aa4.43□□□□□ -1.7
CBF5YLR175W YKL069WP36088 180 aa4.43□□□□□ -1.7
CBF5YLR175W YBR071WP38243 211 aa4.43□□□□□ -1.7
CBF5YLR175W BMT2P38278 337 aa4.43□□□□□ -1.7
CBF5YLR175W RRP3P38712 501 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W YHR127WP38833 243 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W PFS1P38872 237 aa4.43□□□□□ -1.7
CBF5YLR175W PCF11P39081 626 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W GIP2P40036 548 aa4.43□□□□□ -1.7
CBF5YLR175W NDE1P40215 560 aa4.43□□□□□ -1.7
CBF5YLR175W ALG5P40350 334 aa4.43□□□□□ -1.7
CBF5YLR175W COS4P43542 379 aa4.43□□□□□ -1.7
CBF5YLR175W MET12P46151 657 aa4.43□□□□□ -1.7
CBF5YLR175W YJR030CP47101 745 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms