RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C PAP1P29468 568 aaKnown RBP3.7□□□□□ -1.82
SMD3YLR147C YME1P32795 747 aa3.7□□□□□ -1.82
SMD3YLR147C MBB1P39534 108 aa3.7□□□□□ -1.82
SMD3YLR147C YEL057CP39983 233 aa3.7□□□□□ -1.82
SMD3YLR147C GWT1P47026 490 aa3.7□□□□□ -1.82
SMD3YLR147C PET130P47065 347 aa3.7□□□□□ -1.82
SMD3YLR147C RBG2P53295 368 aaKnown RBP3.7□□□□□ -1.82
SMD3YLR147C SLG1P54867 378 aa3.7□□□□□ -1.82
SMD3YLR147C MES1P00958 751 aaKnown RBP3.69□□□□□ -1.82
SMD3YLR147C GCN4P03069 281 aa3.69□□□□□ -1.82
SMD3YLR147C HSC82P15108 705 aaKnown RBP3.69□□□□□ -1.82
SMD3YLR147C EXO70P19658 623 aa3.69□□□□□ -1.82
SMD3YLR147C ATP11P32453 318 aa3.69□□□□□ -1.82
SMD3YLR147C SDS24P38314 527 aa3.69□□□□□ -1.82
SMD3YLR147C YMR147WP40218 223 aaKnown RBP3.69□□□□□ -1.82
SMD3YLR147C YPI1P43587 155 aa3.69□□□□□ -1.82
SMD3YLR147C MSO1P53604 210 aaKnown RBP3.69□□□□□ -1.82
SMD3YLR147C ARK1P53974 638 aa3.69□□□□□ -1.82
SMD3YLR147C MFB1Q04922 465 aa3.69□□□□□ -1.82
SMD3YLR147C HNT3Q08702 217 aa3.69□□□□□ -1.82
SMD3YLR147C BUB3P26449 341 aa3.68□□□□□ -1.82
SMD3YLR147C SPG5P42933 373 aa3.68□□□□□ -1.82
SMD3YLR147C CAF130P53280 1122 aaPredicted RBP3.68□□□□□ -1.82
SMD3YLR147C YDL121CQ07541 149 aa3.68□□□□□ -1.82
SMD3YLR147C YDL007C-AQ2V2Q0 85 aa3.68□□□□□ -1.82
SMD3YLR147C FOB1O13329 566 aa3.67□□□□□ -1.82
SMD3YLR147C MFT1P33441 392 aaKnown RBP3.67□□□□□ -1.82
SMD3YLR147C ERP2P39704 215 aa3.67□□□□□ -1.82
SMD3YLR147C FAU1P40099 211 aa3.67□□□□□ -1.82
SMD3YLR147C DOT5P40553 215 aa3.67□□□□□ -1.82
SMD3YLR147C SEC39Q12745 709 aa3.67□□□□□ -1.82
SMD3YLR147C YER078W-AQ3E7A2 54 aa3.67□□□□□ -1.82
SMD3YLR147C LPD1P09624 499 aaKnown RBP3.66□□□□□ -1.82
SMD3YLR147C RPL31BP0C2H9 113 aaKnown RBP3.66□□□□□ -1.82
SMD3YLR147C SPO22P40511 975 aa3.66□□□□□ -1.82
SMD3YLR147C SYG1P40528 902 aa3.66□□□□□ -1.82
SMD3YLR147C ELP2P42935 788 aa3.66□□□□□ -1.82
SMD3YLR147C YDR239CQ03780 787 aa3.66□□□□□ -1.82
SMD3YLR147C TAP42Q04372 366 aa3.66□□□□□ -1.82
SMD3YLR147C MED1Q12321 566 aa3.66□□□□□ -1.82
SMD3YLR147C RRD2Q12461 358 aa3.66□□□□□ -1.82
SMD3YLR147C BRR1Q99177 341 aaPredicted RBP3.66□□□□□ -1.82
SMD3YLR147C RAV1P47104 1357 aa3.65□□□□□ -1.82
SMD3YLR147C FUN19P28003 413 aaPredicted RBP3.65□□□□□ -1.83
SMD3YLR147C YBP1P38315 674 aa3.65□□□□□ -1.83
SMD3YLR147C GCD10P41814 478 aa3.65□□□□□ -1.83
SMD3YLR147C TIM10P87108 93 aa3.65□□□□□ -1.83
SMD3YLR147C OCA4P25366 362 aa3.64□□□□□ -1.83
SMD3YLR147C FRE2P36033 711 aa3.64□□□□□ -1.83
SMD3YLR147C CST26P38226 397 aa3.64□□□□□ -1.83
SMD3YLR147C RRT5P43607 289 aa3.64□□□□□ -1.83
SMD3YLR147C ART5P53244 586 aaKnown RBP3.64□□□□□ -1.83
SMD3YLR147C PDS5Q04264 1277 aa3.64□□□□□ -1.83
SMD3YLR147C MRD1Q06106 887 aaKnown RBP3.64□□□□□ -1.83
SMD3YLR147C RRI2Q12348 645 aa3.64□□□□□ -1.83
SMD3YLR147C ARG3P05150 338 aa3.63□□□□□ -1.83
SMD3YLR147C HIP1P06775 603 aa3.63□□□□□ -1.83
SMD3YLR147C CHS1P08004 1131 aa3.63□□□□□ -1.83
SMD3YLR147C RFS1P38234 210 aaKnown RBP3.63□□□□□ -1.83
SMD3YLR147C AVT4P50944 713 aa3.63□□□□□ -1.83
SMD3YLR147C TWF1P53250 332 aa3.63□□□□□ -1.83
SMD3YLR147C RPT6Q01939 405 aaKnown RBP3.63□□□□□ -1.83
SMD3YLR147C PIR3Q03180 325 aa3.63□□□□□ -1.83
SMD3YLR147C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SMD3YLR147C CPR1P14832 162 aaKnown RBP3.62□□□□□ -1.83
SMD3YLR147C GLC7P32598 312 aaKnown RBP3.62□□□□□ -1.83
SMD3YLR147C SEC66P33754 206 aa3.62□□□□□ -1.83
SMD3YLR147C MET18P40469 1032 aa3.62□□□□□ -1.83
SMD3YLR147C MKT1P40850 830 aaKnown RBP3.62□□□□□ -1.83
SMD3YLR147C POP1P41812 875 aa3.62□□□□□ -1.83
SMD3YLR147C RMD8P43620 662 aa3.62□□□□□ -1.83
SMD3YLR147C URB2P47108 1174 aa3.62□□□□□ -1.83
SMD3YLR147C OCA1P50946 238 aaPredicted RBP3.62□□□□□ -1.83
SMD3YLR147C YGL108CP53139 140 aa3.62□□□□□ -1.83
SMD3YLR147C JJJ1P53863 590 aa3.62□□□□□ -1.83
SMD3YLR147C SMA2Q04658 369 aa3.62□□□□□ -1.83
SMD3YLR147C BUD21Q08492 214 aaPredicted RBP3.62□□□□□ -1.83
SMD3YLR147C NDI1P32340 513 aa3.61□□□□□ -1.83
SMD3YLR147C MRP4P32902 394 aa3.61□□□□□ -1.83
SMD3YLR147C PMT1P33775 817 aa3.61□□□□□ -1.83
SMD3YLR147C VMA13P41807 478 aaKnown RBP3.61□□□□□ -1.83
SMD3YLR147C OGG1P53397 376 aaPredicted RBP3.61□□□□□ -1.83
SMD3YLR147C SWH1P35845 1188 aa3.6□□□□□ -1.83
SMD3YLR147C RSM22P36056 628 aa3.6□□□□□ -1.83
SMD3YLR147C CMC1P36064 111 aa3.6□□□□□ -1.83
SMD3YLR147C THI2P38141 450 aa3.6□□□□□ -1.83
SMD3YLR147C VID24P38263 362 aa3.6□□□□□ -1.83
SMD3YLR147C ISC1P40015 477 aaKnown RBP3.6□□□□□ -1.83
SMD3YLR147C TRS85P46944 698 aa3.6□□□□□ -1.83
SMD3YLR147C YGL242CP53066 181 aa3.6□□□□□ -1.83
SMD3YLR147C KTR5P53966 522 aaPredicted RBP3.6□□□□□ -1.83
SMD3YLR147C ATG29Q12092 213 aa3.6□□□□□ -1.83
SMD3YLR147C LEU4P06208 619 aaKnown RBP3.59□□□□□ -1.83
SMD3YLR147C REV1P12689 985 aa3.59□□□□□ -1.83
SMD3YLR147C HEM15P16622 393 aa3.59□□□□□ -1.83
SMD3YLR147C ATP10P18496 279 aa3.59□□□□□ -1.83
SMD3YLR147C CAF40P53829 373 aa3.59□□□□□ -1.83
SMD3YLR147C YOR387CQ08910 206 aa3.59□□□□□ -1.83
SMD3YLR147C THP3Q12049 470 aaKnown RBP3.59□□□□□ -1.83
SMD3YLR147C ERV2Q12284 196 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms