RNA–Protein interactions for RNA: YLR141W

RRN5, Transcript of Protein involved in transcription of rDNA by RNA polymerase I, yeast

Gene RRN5, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN5	YLR141W	PNO1	Q99216	274 aa	Known RBP	13.91	□□□□□ -0.18
RRN5	YLR141W	CUP1-1	P0CX80	61 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	CUP1-2	P0CX81	61 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	BUB2	P26448	306 aa	Predicted RBP	13.9	□□□□□ -0.18
RRN5	YLR141W	MLS1	P30952	554 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	PET112	P33893	541 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	YBR071W	P38243	211 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	BZZ1	P38822	633 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	SHU2	P38957	223 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	MPS1	P54199	764 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	PRO2	P54885	456 aa	Known RBP	13.9	□□□□□ -0.18
RRN5	YLR141W	GIP3	Q03016	1276 aa		13.9	□□□□□ -0.18
RRN5	YLR141W	YMR111C	Q04461	462 aa	Predicted RBP	13.9	□□□□□ -0.18
RRN5	YLR141W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	13.89	□□□□□ -0.19	not detected
RRN5	YLR141W	CTP1	P38152	299 aa		13.89	□□□□□ -0.19
RRN5	YLR141W	YBR062C	P38239	180 aa		13.89	□□□□□ -0.19
RRN5	YLR141W	ALR2	P43553	858 aa		13.89	□□□□□ -0.19
RRN5	YLR141W	YGR053C	P53234	283 aa		13.89	□□□□□ -0.19
RRN5	YLR141W	YGR250C	P53316	781 aa	Known RBP	13.89	□□□□□ -0.19
RRN5	YLR141W	YDL121C	Q07541	149 aa		13.89	□□□□□ -0.19
RRN5	YLR141W	NUM1	Q00402	2748 aa		13.88	□□□□□ -0.19
RRN5	YLR141W	FUN30	P31380	1131 aa		13.88	□□□□□ -0.19
RRN5	YLR141W	CBP4	P37267	147 aa		13.88	□□□□□ -0.19
RRN5	YLR141W	YCL012C	Q8J0M4	134 aa		13.88	□□□□□ -0.19
RRN5	YLR141W	MNL1	P38888	796 aa		13.87	□□□□□ -0.19
RRN5	YLR141W	ARB1	P40024	610 aa	Known RBP	13.87	□□□□□ -0.19
RRN5	YLR141W	TRS85	P46944	698 aa		13.87	□□□□□ -0.19
RRN5	YLR141W	SED5	Q01590	340 aa		13.87	□□□□□ -0.19
RRN5	YLR141W	BSC2	Q05611	235 aa		13.87	□□□□□ -0.19
RRN5	YLR141W	TRP3	P00937	484 aa		13.86	□□□□□ -0.19
RRN5	YLR141W	HXK2	P04807	486 aa	Known RBP	13.86	□□□□□ -0.19
RRN5	YLR141W	LEU4	P06208	619 aa	Known RBP	13.86	□□□□□ -0.19
RRN5	YLR141W	RPC19	P28000	142 aa	Known RBP	13.86	□□□□□ -0.19
RRN5	YLR141W	YRO2	P38079	344 aa		13.86	□□□□□ -0.19
RRN5	YLR141W	BCY1	P07278	416 aa	Known RBP	13.85	□□□□□ -0.19
RRN5	YLR141W	OCA4	P25366	362 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	SPS22	P25380	463 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	SRB5	P32585	307 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	LOS1	P33418	1100 aa	Predicted RBP	13.85	□□□□□ -0.19
RRN5	YLR141W	APT2	P36973	181 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	HSM3	P38348	480 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	YHR112C	P38716	378 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	MAD2	P40958	196 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	IBA57	P47158	497 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	MRM2	P53123	320 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	SHE9	Q04172	456 aa		13.85	□□□□□ -0.19
RRN5	YLR141W	DST1	P07273	309 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	DBR1	P24309	405 aa	Known RBP	13.84	□□□□□ -0.19
RRN5	YLR141W	ERG1	P32476	496 aa	Known RBP	13.84	□□□□□ -0.19
RRN5	YLR141W	CDC5	P32562	705 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	YEN1	P40028	759 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	UBP6	P43593	499 aa	Known RBP	13.84	□□□□□ -0.19
RRN5	YLR141W	YNL010W	P53981	241 aa	Known RBP	13.84	□□□□□ -0.19
RRN5	YLR141W	MET31	Q03081	177 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	MUS81	Q04149	632 aa	Predicted RBP	13.84	□□□□□ -0.19
RRN5	YLR141W	ESA1	Q08649	445 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	NMD4	Q12129	218 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	ATG34	Q12292	412 aa		13.84	□□□□□ -0.19
RRN5	YLR141W	NPP1	P25353	742 aa		13.83	□□□□□ -0.2
RRN5	YLR141W	PTC2	P39966	464 aa	Known RBP	13.83	□□□□□ -0.2
RRN5	YLR141W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	13.83	□□□□□ -0.2	not detected
RRN5	YLR141W	YNL140C	P53910	189 aa		13.83	□□□□□ -0.2
RRN5	YLR141W	GLO2	Q05584	274 aa		13.83	□□□□□ -0.2
RRN5	YLR141W	GIC2	Q06648	383 aa		13.83	□□□□□ -0.2
RRN5	YLR141W	GLE1	Q12315	538 aa		13.83	□□□□□ -0.2
RRN5	YLR141W	YKR078W	P36158	585 aa	Known RBP	13.82	□□□□□ -0.2
RRN5	YLR141W	MRPL15	P36523	253 aa		13.82	□□□□□ -0.2
RRN5	YLR141W	ASC1	P38011	319 aa	Known RBP	13.82	□□□□□ -0.2
RRN5	YLR141W	YIL086C	P40503	102 aa		13.82	□□□□□ -0.2
RRN5	YLR141W	NAS6	P50086	228 aa		13.82	□□□□□ -0.2
RRN5	YLR141W	YDR124W	Q04608	324 aa		13.82	□□□□□ -0.2
RRN5	YLR141W	GCD2	P12754	651 aa	Predicted RBP	13.81	□□□□□ -0.2
RRN5	YLR141W	MRE11	P32829	692 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	HES1	P35843	434 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	FTH1	P38310	465 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	MTG2	P38860	518 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	MEP2	P41948	499 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	TRM9	P49957	279 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	CUS2	P53830	285 aa	Predicted RBP	13.81	□□□□□ -0.2
RRN5	YLR141W	REX2	P54964	269 aa	Known RBP	13.81	□□□□□ -0.2
RRN5	YLR141W	YEH2	Q07950	538 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	XYL2	Q07993	356 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	RRP40	Q08285	240 aa	Known RBP	13.81	□□□□□ -0.2
RRN5	YLR141W	MMT2	Q08970	484 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	RUP1	Q12242	671 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	YLL054C	Q12244	843 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	FRE7	Q12333	620 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	YPT6	Q99260	215 aa		13.81	□□□□□ -0.2
RRN5	YLR141W	CAR1	P00812	333 aa	Known RBP	13.8	□□□□□ -0.2
RRN5	YLR141W	HO	P09932	586 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	PET127	P32606	800 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	CAF4	P36130	643 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	YCR087C-A	P37263	153 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	PTR3	P43606	678 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	SDT1	P53078	280 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	ROG1	P53118	685 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	YGR266W	P53326	701 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	TRS23	Q03784	219 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	REX4	Q08237	289 aa		13.8	□□□□□ -0.2
RRN5	YLR141W	GYP1	Q08484	637 aa		13.8	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms