RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YCR099CP25657 155 aa10.79□□□□□ -0.68
SPT8YLR055C CDC5P32562 705 aa10.79□□□□□ -0.68
SPT8YLR055C GDH3P39708 457 aa10.79□□□□□ -0.68
SPT8YLR055C KTR7P40504 517 aa10.79□□□□□ -0.68
SPT8YLR055C FKH2P41813 862 aa10.79□□□□□ -0.68
SPT8YLR055C GYP8P43570 497 aa10.79□□□□□ -0.68
SPT8YLR055C PTR3P43606 678 aa10.79□□□□□ -0.68
SPT8YLR055C GLG2P47011 380 aa10.79□□□□□ -0.68
SPT8YLR055C MSE1P48525 536 aa10.79□□□□□ -0.68
SPT8YLR055C YPL107WQ02873 248 aa10.79□□□□□ -0.68
SPT8YLR055C ARR1Q06596 294 aa10.79□□□□□ -0.68
SPT8YLR055C VAM6Q07468 1049 aa10.79□□□□□ -0.68
SPT8YLR055C NGL1Q08213 363 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C NDD1Q08887 554 aa10.79□□□□□ -0.68
SPT8YLR055C JLP1Q12358 412 aa10.79□□□□□ -0.68
SPT8YLR055C MHF1Q3E835 90 aa10.79□□□□□ -0.68
SPT8YLR055C RPS14AP06367 137 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C AMD1P15274 810 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C RPS14BP39516 138 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C HEM14P40012 539 aa10.79□□□□□ -0.68
SPT8YLR055C RGI1P40043 161 aaPredicted RBP10.79□□□□□ -0.68
SPT8YLR055C DOT6P40059 670 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C IMP4P53941 290 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C SPP2Q02521 185 aa10.79□□□□□ -0.68
SPT8YLR055C NUP100Q02629 959 aa10.79□□□□□ -0.68
SPT8YLR055C MUS81Q04149 632 aaPredicted RBP10.79□□□□□ -0.68
SPT8YLR055C YHC1Q05900 231 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C NFI1Q12216 726 aa10.79□□□□□ -0.68
SPT8YLR055C DCP1Q12517 231 aaPredicted RBP10.79□□□□□ -0.68
SPT8YLR055C RPS9AO13516 197 aaKnown RBP10.78□□□□□ -0.68
SPT8YLR055C RPL6BP05739 176 aaKnown RBP10.78□□□□□ -0.68
SPT8YLR055C HIS5P07172 385 aa10.78□□□□□ -0.68
SPT8YLR055C REV1P12689 985 aa10.78□□□□□ -0.68
SPT8YLR055C KIN3P22209 435 aa10.78□□□□□ -0.68
SPT8YLR055C MRPL40P36534 297 aa10.78□□□□□ -0.68
SPT8YLR055C SOP4P39543 234 aaPredicted RBP10.78□□□□□ -0.68
SPT8YLR055C BOL3P39724 118 aa10.78□□□□□ -0.68
SPT8YLR055C DLD3P39976 496 aaKnown RBP10.78□□□□□ -0.68
SPT8YLR055C FAR7P43592 221 aa10.78□□□□□ -0.68
SPT8YLR055C DLD2P46681 530 aaKnown RBP10.78□□□□□ -0.68
SPT8YLR055C AIM23P47015 356 aa10.78□□□□□ -0.68
SPT8YLR055C NAS6P50086 228 aa10.78□□□□□ -0.68
SPT8YLR055C CWC23P52868 283 aaPredicted RBP10.78□□□□□ -0.68
SPT8YLR055C PGC1Q08959 321 aa10.78□□□□□ -0.68
SPT8YLR055C TRM10Q12400 293 aa10.78□□□□□ -0.68
SPT8YLR055C MHF2Q3E829 80 aa10.78□□□□□ -0.68
SPT8YLR055C ENA1P13587 1091 aa10.77□□□□□ -0.68
SPT8YLR055C GUK1P15454 187 aaKnown RBP10.77□□□□□ -0.68
SPT8YLR055C KGD1P20967 1014 aaKnown RBP10.77□□□□□ -0.68
SPT8YLR055C PRP19P32523 503 aaKnown RBP10.77□□□□□ -0.68
SPT8YLR055C ARP1P38696 384 aa10.77□□□□□ -0.68
SPT8YLR055C IPT1P38954 527 aa10.77□□□□□ -0.68
SPT8YLR055C REF2P42073 533 aaPredicted RBP10.77□□□□□ -0.68
SPT8YLR055C NUP85P46673 744 aa10.77□□□□□ -0.68
SPT8YLR055C YNR014WP53719 212 aa10.77□□□□□ -0.68
SPT8YLR055C FAP1P53971 965 aa10.77□□□□□ -0.68
SPT8YLR055C ENA2Q01896 1091 aa10.77□□□□□ -0.68
SPT8YLR055C RSC4Q02206 625 aa10.77□□□□□ -0.68
SPT8YLR055C FIN1Q03898 291 aa10.77□□□□□ -0.68
SPT8YLR055C RCO1Q04779 684 aa10.77□□□□□ -0.68
SPT8YLR055C BBP1Q12365 385 aa10.77□□□□□ -0.68
SPT8YLR055C ENA5Q12691 1091 aa10.77□□□□□ -0.68
SPT8YLR055C HTA2P04912 132 aa10.77□□□□□ -0.69
SPT8YLR055C CLN1P20437 546 aa10.77□□□□□ -0.69
SPT8YLR055C VPS33P20795 691 aa10.77□□□□□ -0.69
SPT8YLR055C MRPL6P32904 214 aa10.77□□□□□ -0.69
SPT8YLR055C MAK5P38112 773 aaPredicted RBP10.77□□□□□ -0.69
SPT8YLR055C EFM1P38732 585 aa10.77□□□□□ -0.69
SPT8YLR055C NEM1P38757 446 aa10.77□□□□□ -0.69
SPT8YLR055C ERG10P41338 398 aaKnown RBP10.77□□□□□ -0.69
SPT8YLR055C EFM6P53970 246 aa10.77□□□□□ -0.69
SPT8YLR055C ABZ2Q03266 374 aa10.77□□□□□ -0.69
SPT8YLR055C EMG1Q06287 252 aaKnown RBP10.77□□□□□ -0.69
SPT8YLR055C IRC10Q08118 586 aa10.77□□□□□ -0.69
SPT8YLR055C PBS2P08018 668 aa10.76□□□□□ -0.69
SPT8YLR055C RPS4AP0CX35 261 aaKnown RBP10.76□□□□□ -0.69
SPT8YLR055C RPS4BP0CX36 261 aaKnown RBP10.76□□□□□ -0.69
SPT8YLR055C HIR2P32480 875 aa10.76□□□□□ -0.69
SPT8YLR055C STE5P32917 917 aa10.76□□□□□ -0.69
SPT8YLR055C YAR028WP39548 234 aa10.76□□□□□ -0.69
SPT8YLR055C EXO1P39875 702 aa10.76□□□□□ -0.69
SPT8YLR055C YNR065CP53751 1116 aa10.76□□□□□ -0.69
SPT8YLR055C YMR111CQ04461 462 aaPredicted RBP10.76□□□□□ -0.69
SPT8YLR055C RPN6Q12377 434 aa10.76□□□□□ -0.69
SPT8YLR055C RIB3Q99258 208 aa10.76□□□□□ -0.69
SPT8YLR055C PHO3P24031 467 aa10.75□□□□□ -0.69
SPT8YLR055C YLF2P38746 405 aa10.75□□□□□ -0.69
SPT8YLR055C YEL020CP39994 560 aa10.75□□□□□ -0.69
SPT8YLR055C AMA1P50082 593 aa10.75□□□□□ -0.69
SPT8YLR055C YMR010WQ03687 405 aa10.75□□□□□ -0.69
SPT8YLR055C LDB18Q07887 179 aa10.75□□□□□ -0.69
SPT8YLR055C HTZ1Q12692 134 aaKnown RBP10.75□□□□□ -0.69
SPT8YLR055C YPL119C-AQ3E751 87 aa10.75□□□□□ -0.69
SPT8YLR055C FRT1Q99332 602 aa10.75□□□□□ -0.69
SPT8YLR055C FUS1P11710 512 aa10.74□□□□□ -0.69
SPT8YLR055C CLG1P35190 452 aa10.74□□□□□ -0.69
SPT8YLR055C CEM1P39525 442 aa10.74□□□□□ -0.69
SPT8YLR055C FCY21P40039 528 aa10.74□□□□□ -0.69
SPT8YLR055C HOC1P47124 396 aa10.74□□□□□ -0.69
SPT8YLR055C GTO1P48239 356 aa10.74□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 120.9 ms